Evidence map›Paper›PMID 26567312›Full record

ArticleApplied and environmental microbiology2016

Characterization of the Vibrio fischeri Fatty Acid Chemoreceptors, VfcB and VfcB2.

K Nikolakakis, K Monfils, S Moriano-Gutierrez, C A Brennan, E G Ruby

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Lighting the way: how theJournal of bacteriology · 2024
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. The Response ofFrontiers in microbiology · 2018
    Article
  7. Article
  8. Article
  9. Article
  10. Impact and Influence of the NaturalFrontiers in microbiology · 2016
    Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

K NikolakakisDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, Wisconsin, USA.
K MonfilsDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, Wisconsin, USA.
S Moriano-GutierrezDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, Wisconsin, USA.
C A BrennanDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, Wisconsin, USA.
E G RubyDepartment of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, Wisconsin, USA eruby@hawaii.edu.

Funding

VIBRIO VIRULENCE DETERMINANTS IN A BENIGN COLONIZATIONR01RR012294 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI RUBY, EDWARD G · 1996 to 2011
$6.4M
Vibrio fischeri as a Model for Bacterial ColonizationR37AI050661 · NIAID · UNIVERSITY OF HAWAII AT MANOA · PI MARGARET J MC FALL-NGAI, Edward G Ruby · 2018 to 2026
$5.4M
Vibrio fischeri as a model of Bacterial ColonizationR01AI050661 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI MC FALL-NGAI, MARGARET J, RUBY, EDWARD G · 2002 to 2016
$5.0M
Vibrio Virulence Determinants in a Benign ColonizationR01OD011024 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI MC FALL-NGAI, MARGARET J, RUBY, EDWARD G · 2012 to 2020
$3.9M
Chemotactic Cues in the Symbiosis Between Vibrio fischeri and Euprymna scolopesF32GM112214 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI NIKOLAKAKIS, KIEL · 2014 to 2016
$112k
NCRR NIH HHS R01 RR012294NCRR NIH HHS RR12294NIAID NIH HHS AI050661NIAID NIH HHS R01 AI050661NIAID NIH HHS R37 AI050661NIGMS NIH HHS F32 GM112214NIGMS NIH HHS F32GM112214NIH HHS OD11024NIH HHS R01 OD011024
6 · The paper itself

Abstract

Bacteria use a wide variety of methyl-accepting chemotaxis proteins (MCPs) to mediate their attraction to or repulsion from different chemical signals in their environment. The bioluminescent marine bacterium Vibrio fischeri is the monospecific symbiont of the Hawaiian bobtail squid, Euprymna scolopes, and encodes a large repertoire of MCPs that are hypothesized to be used during different parts of its complex, multistage lifestyle. Here, we report the initial characterization of two such MCPs from V. fischeri that are responsible for mediating migration toward short- and medium-chain aliphatic (or fatty) acids. These receptors appear to be distributed among only members of the family Vibrionaceae and are likely descended from a receptor that has been lost by the majority of the members of this family. While chemotaxis greatly enhances the efficiency of host colonization by V. fischeri, fatty acids do not appear to be used as a chemical cue during this stage of the symbiosis. This study presents an example of straight-chain fatty acid chemoattraction and contributes to the growing body of characterized MCP-ligand interactions.

Indexed as

Aliivibrio fischeriAnimalsBacterial ProteinsDecapodiformesFatty AcidsMembrane ProteinsMethyl-Accepting Chemotaxis ProteinsPhylogenyBacterial ProteinsFatty AcidsMembrane ProteinsMethyl-Accepting Chemotaxis Proteins

Identifiers

PMID26567312
PMCPMC4711111

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.