Evidence map›Paper›PMID 26567300›Full record

ArticleApplied and environmental microbiology2016

Microbial Mat Communities along an Oxygen Gradient in a Perennially Ice-Covered Antarctic Lake.

Anne D Jungblut, Ian Hawes, Tyler J Mackey, Megan Krusor, Peter T Doran, Dawn Y Sumner, Jonathan A Eisen, Colin Hillman, Alexander K Goroncy

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Review
  2. Article
  3. An early diverging SQR enzyme in AntarcticMicrobiology spectrum · 2026
    Article
  4. Article
  5. Biofilms in modern CaCOScientific reports · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Anne D JungblutLife Sciences Department, The Natural History Museum, London, United Kingdom a.jungblut@nhm.ac.uk.
Ian HawesUniversity of Canterbury, Christchurch, New Zealand.
Tyler J MackeyDepartment of Earth and Planetary Sciences, University of California, Davis, Davis, California, USA.
Megan KrusorMicrobiology Graduate Group, University of California, Davis, Davis, California, USA.
Peter T DoranDepartment of Geology and Geophysics, Louisiana State University, Baton Rouge, Louisiana, USA.
Dawn Y SumnerDepartment of Earth and Planetary Sciences, University of California, Davis, Davis, California, USA.
Jonathan A EisenMicrobiology Graduate Group, University of California, Davis, Davis, California, USA Department of Geology and Geophysics, Louisiana State University, Baton Rouge, Louisiana, USA.
Colin HillmanUniversity of Canterbury, Christchurch, New Zealand.
Alexander K GoroncyUniversity of Canterbury, Christchurch, New Zealand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lake Fryxell is a perennially ice-covered lake in the McMurdo Dry Valleys, Antarctica, with a sharp oxycline in a water column that is density stabilized by a gradient in salt concentration. Dissolved oxygen falls from 20 mg liter(-1) to undetectable over one vertical meter from 8.9- to 9.9-m depth. We provide the first description of the benthic mat community that falls within this oxygen gradient on the sloping floor of the lake, using a combination of micro- and macroscopic morphological descriptions, pigment analysis, and 16S rRNA gene bacterial community analysis. Our work focused on three macroscopic mat morphologies that were associated with different parts of the oxygen gradient: (i) "cuspate pinnacles" in the upper hyperoxic zone, which displayed complex topography and were dominated by phycoerythrin-rich cyanobacteria attributable to the genus Leptolyngbya and a diverse but sparse assemblage of pennate diatoms; (ii) a less topographically complex "ridge-pit" mat located immediately above the oxic-anoxic transition containing Leptolyngbya and an increasing abundance of diatoms; and (iii) flat prostrate mats in the upper anoxic zone, dominated by a green cyanobacterium phylogenetically identified as Phormidium pseudopriestleyi and a single diatom, Diadesmis contenta. Zonation of bacteria was by lake depth and by depth into individual mats. Deeper mats had higher abundances of bacteriochlorophylls and anoxygenic phototrophs, including Chlorobi and Chloroflexi. This suggests that microbial communities form assemblages specific to niche-like locations. Mat morphologies, underpinned by cyanobacterial and diatom composition, are the result of local habitat conditions likely defined by irradiance and oxygen and sulfide concentrations.

Indexed as

Antarctic RegionsBacteriaBiodiversityIce CoverLakesMolecular Sequence DataOxygenPhylogenyOxygen

Identifiers

PMID26567300
PMCPMC4711149

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.