Evidence map›Paper›PMID 26566866›Full record

ArticleCell cycle (Georgetown, Tex.)2015

Shifts in rDNA levels act as a genome buffer promoting chromosome homeostasis.

Anna Deregowska, Jagoda Adamczyk, Aleksandra Kwiatkowska, Artur Gurgul, Marek Skoneczny, Adrianna Skoneczna, Tomasz Szmatola, Igor Jasielczuk, Michal Magda, Ewa Rawska and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
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  7. Review
  8. Cell Size Influences the Reproductive Potential and Total Lifespan of theOxidative medicine and cellular longevity · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Anna Deregowskaa Department of Genetics ; University of Rzeszow ; Rzeszow , Poland.
Jagoda Adamczyka Department of Genetics ; University of Rzeszow ; Rzeszow , Poland.
Aleksandra Kwiatkowskaa Department of Genetics ; University of Rzeszow ; Rzeszow , Poland.
Artur Gurgulb Department of Genomics and Molecular Biology of Animals ; Laboratory of Genomics; National Research Institute of Animal Production ; Cracow , Poland.
Marek Skonecznyc Department of Genetics ; Institute of Biochemistry and Biophysics; Polish Academy of Sciences ; Warsaw , Poland.
Adrianna Skonecznad Laboratory of Mutagenesis and DNA Repair; Institute of Biochemistry and Biophysics; Polish Academy of Sciences ; Warsaw , Poland.
Tomasz Szmatolab Department of Genomics and Molecular Biology of Animals ; Laboratory of Genomics; National Research Institute of Animal Production ; Cracow , Poland.
Igor Jasielczukb Department of Genomics and Molecular Biology of Animals ; Laboratory of Genomics; National Research Institute of Animal Production ; Cracow , Poland.
Michal Magdaa Department of Genetics ; University of Rzeszow ; Rzeszow , Poland.
Ewa Rawskaa Department of Genetics ; University of Rzeszow ; Rzeszow , Poland.
Sylwia Pabiana Department of Genetics ; University of Rzeszow ; Rzeszow , Poland.
Anita Paneka Department of Genetics ; University of Rzeszow ; Rzeszow , Poland.
Jakub Kaplana Department of Genetics ; University of Rzeszow ; Rzeszow , Poland.
Anna Lewinskae Department of Biochemistry and Cell Biology ; University of Rzeszow; Rzeszow , Poland.
Maciej Wnuka Department of Genetics ; University of Rzeszow ; Rzeszow , Poland.
Rzeszów University · PLGenomics (United Kingdom) · GBInstitute of Biochemistry and Biophysics, Polish Academy of Sciences · PLNational Research Institute of Animal Production · PLPolish Academy of Sciences · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nucleolus is considered to be a stress sensor and rDNA-based regulation of cellular senescence and longevity has been proposed. However, the role of rDNA in the maintenance of genome integrity has not been investigated in detail. Using genomically diverse industrial yeasts as a model and array-based comparative genomic hybridization (aCGH), we show that chromosome level may be balanced during passages and as a response to alcohol stress that may be associated with changes in rDNA pools. Generation- and ethanol-mediated changes in genes responsible for protein and DNA/RNA metabolism were revealed using next-generation sequencing. Links between redox homeostasis, DNA stability, and telomere and nucleolus states were also established. These results suggest that yeast genome is dynamic and chromosome homeostasis may be controlled by rDNA.

Indexed as

Genome, FungalCell NucleolusChromosomes, FungalComparative Genomic HybridizationDNA DamageDNA, FungalDNA, RibosomalEthanolGene Expression Regulation, FungalGenomic InstabilityHomeostasisOxidation-ReductionOxidative StressSaccharomyces cerevisiaeSelection, GeneticTelomereDNA, FungalDNA, RibosomalEthanolchromosomesethanolgenome profilingindustrial yeastsrDNAselective pressure

Identifiers

PMID26566866
PMCPMC4825570
OpenAlexW2173733246

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.