Evidence map›Paper›PMID 26566612›Full record

ArticleEnvironmental science and pollution research international2016

Detecting the exposure to Cd and PCBs by means of a non-invasive transcriptomic approach in laboratory and wild contaminated European eels (Anguilla anguilla).

Lucie Baillon, Fabien Pierron, Jennifer Oses, Pauline Pannetier, Eric Normandeau, Patrice Couture, Pierre Labadie, Hélène Budzinski, Patrick Lambert, Louis Bernatchez and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Environmental science and pollution research international, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Lucie BaillonUniv. Bordeaux, UMR EPOC CNRS 5805, F-33400, Talence, France.
Fabien PierronUniv. Bordeaux, UMR EPOC CNRS 5805, F-33400, Talence, France. f.pierron@epoc.u-bordeaux1.fr.
Jennifer OsesUniv. Bordeaux, UMR EPOC CNRS 5805, F-33400, Talence, France.
Pauline PannetierInstitut National de la Recherche Scientifique, Centre Eau Terre Environnement, 490 de la Couronne, Québec, QC, G1K 9A9, Canada.
Eric NormandeauDépartement de biologie, Institut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec, QC, G1V 0A6, Canada.
Patrice CoutureInstitut National de la Recherche Scientifique, Centre Eau Terre Environnement, 490 de la Couronne, Québec, QC, G1K 9A9, Canada.
Pierre LabadieUniv. Bordeaux, UMR EPOC CNRS 5805, F-33400, Talence, France.
Hélène BudzinskiUniv. Bordeaux, UMR EPOC CNRS 5805, F-33400, Talence, France.
Patrick LambertIrtsea, UR EABX, 50 avenue de Verdun-Gazinet, 33612, Cestas, France.
Louis BernatchezDépartement de biologie, Institut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec, QC, G1V 0A6, Canada.
Magalie BaudrimontUniv. Bordeaux, UMR EPOC CNRS 5805, F-33400, Talence, France.
Environnements et Paléoenvironnements Océaniques et Continentaux · FRInstitut National de la Recherche Scientifique · CAUniversité de Bordeaux · FRUniversité Laval · CACEA CESTA · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Detecting and separating specific effects of contaminants in a multi-stress field context remain a major challenge in ecotoxicology. In this context, the aim of this study was to assess the usefulness of a non-invasive transcriptomic method, by means of a complementary DNA (cDNA) microarray comprising 1000 candidate genes, on caudal fin clips. Fin gene transcription patterns of European eels (Anguilla anguilla) exposed in the laboratory to cadmium (Cd) or a polychloro-biphenyl (PCBs) mixture but also of wild eels from three sampling sites with differing contamination levels were compared to test whether fin clips may be used to detect and discriminate the exposure to these contaminants. Also, transcriptomic profiles from the liver and caudal fin of eels experimentally exposed to Cd were compared to assess the detection sensitivity of the fin transcriptomic response. A similar number of genes were differentially transcribed in the fin and liver in response to Cd exposure, highlighting the detection sensitivity of fin clips. Moreover, distinct fin transcription profiles were observed in response to Cd or PCB exposure. Finally, the transcription profiles of eels from the most contaminated site clustered with those from laboratory-exposed fish. This study thus highlights the applicability and usefulness of performing gene transcription assays on non-invasive tissue sampling in order to detect the in situ exposure to Cd and PCBs in fish.

Indexed as

AnguillaAnimalsCadmiumDNA, ComplementaryGene Expression ProfilingPolychlorinated BiphenylsWater Pollutants, ChemicalCadmiumDNA, ComplementaryPolychlorinated BiphenylsWater Pollutants, ChemicalcDNA microarrayEuropean eelMulti-pollutantNon-invasive samplingTranscriptomics

Identifiers

PMID26566612
OpenAlexW2280267306

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.