Evidence map›Paper›PMID 26566425›Full record

ArticleStandards in genomic sciences2015

Genome sequence of Pedobacter glucosidilyticus DD6b, isolated from zooplankton Daphnia magna.

Anja Poehlein, Rolf Daniel, Diliana D Simeonova

Abstract read
In one paragraph

Article in Standards in genomic sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Occurrence and Succession of Bacterial Community in OInternational journal of environmental research and public health · 2019
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Anja PoehleinGenomic and Applied Microbiology and Göttingen Genomics Laboratory, Georg-August University Göttingen, D-37077 Göttingen, Germany.
Rolf DanielGenomic and Applied Microbiology and Göttingen Genomics Laboratory, Georg-August University Göttingen, D-37077 Göttingen, Germany.
Diliana D SimeonovaLaboratory of Microbial Ecology, Department of Biology, University of Konstanz, Universitaetsstr. 10, D-78457 Konstanz, Germany ; Current address: Laboratory of Microbial Biochemistry, Department of General Microbiology, Institute of Microbiology, Bulgarian Academy of Sciences, 26 Georgi Bonchev str., 1113 Sofia, Bulgaria.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The phosphite assimilating bacterium, P. glucosidilyticus DD6b, was isolated from the gut of the zooplankton Daphnia magna. Its 3,872,381 bp high-quality draft genome is arranged into 93 contigs containing 3311 predicted protein-coding and 41 RNA-encoding genes. This genome report presents the specific properties and common features of P. glucosidilyticus DD6b genome in comparison with the genomes of P. glucosidilyticus type strain DSM 23,534, and another five Pedobacter type strains with publicly available completely sequenced genomes. Here, we present the first journal report on P. glucosidilyticus genome sequence and provide information on a new specific physiological determinant of P. glucosidilyticus species.

Indexed as

Pedobacter glucosidilyticusPhosphite assimilationSphingobacteriia

Identifiers

PMID26566425
PMCPMC4642753

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.