Evidence map›Paper›PMID 26565020›Full record

ArticleThe Journal of biological chemistry2016

The N-terminal Region of Chromodomain Helicase DNA-binding Protein 4 (CHD4) Is Essential for Activity and Contains a High Mobility Group (HMG) Box-like-domain That Can Bind Poly(ADP-ribose).

Ana P G Silva, Daniel P Ryan, Yaron Galanty, Jason K K Low, Marylene Vandevenne, Stephen P Jackson, Joel P Mackay

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 63 citations in OpenAlex.

  1. Molecular Acrobats: How CHD Remodelers Shape the Genetic Playground to License Cell Identity.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
  2. Human mutation · 2026
    Review
  3. Intrinsically Disordered Regions Define Unique Protein Interaction Networks in CHD Family Remodelers.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. How does CHD4 slide nucleosomes?Biochemical Society transactions · 2024
    Review
  8. Microscale Thermophoresis Analysis of Chromatin Interactions.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. PARP1-modulated chromatin remodeling is a new target for cancer treatment.Medical oncology (Northwood, London, England) · 2021
    Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Ana P G SilvaFrom the School of Molecular Bioscience, The University of Sydney, New South Wales 2006, Australia, ana.silva@sydney.edu.au.
Daniel P RyanDepartment of Genome Sciences, The John Curtin School of Medical Research, The Australian National University, Canberra, Australian Capital Territory 2601, and.
Yaron GalantyThe Wellcome Trust and Cancer Research UK Gurdon Institute, University of Cambridge, Cambridge CB2 1QN, United Kingdom.
Jason K K LowFrom the School of Molecular Bioscience, The University of Sydney, New South Wales 2006, Australia.
Marylene VandevenneFrom the School of Molecular Bioscience, The University of Sydney, New South Wales 2006, Australia.
Stephen P JacksonThe Wellcome Trust and Cancer Research UK Gurdon Institute, University of Cambridge, Cambridge CB2 1QN, United Kingdom.
Joel P MackayFrom the School of Molecular Bioscience, The University of Sydney, New South Wales 2006, Australia, joel.mackay@sydney.edu.au.
University of Sydney · AUWellcome Trust · GBAustralian National University · AU

Funding

Cancer Research UK 11224Cancer Research UK 18796
6 · The paper itself

Abstract

Chromodomain Helicase DNA-binding protein 4 (CHD4) is a chromatin-remodeling enzyme that has been reported to regulate DNA-damage responses through its N-terminal region in a poly(ADP-ribose) polymerase-dependent manner. We have identified and determined the structure of a stable domain (CHD4-N) in this N-terminal region. The-fold consists of a four-α-helix bundle with structural similarity to the high mobility group box, a domain that is well known as a DNA binding module. We show that the CHD4-N domain binds with higher affinity to poly(ADP-ribose) than to DNA. We also show that the N-terminal region of CHD4, although not CHD4-N alone, is essential for full nucleosome remodeling activity and is important for localizing CHD4 to sites of DNA damage. Overall, these data build on our understanding of how CHD4-NuRD acts to regulate gene expression and participates in the DNA-damage response.

Indexed as

HMG-Box DomainsAmino Acid SequenceAutoantigensChromatin Assembly and DisassemblyConserved SequenceDNADNA Breaks, Double-StrandedDNA DamageHEK293 CellsHumansMi-2 Nucleosome Remodeling and Deacetylase ComplexModels, MolecularMolecular Sequence DataNucleosomesPeptidesPoly Adenosine Diphosphate RiboseAutoantigensCHD4 protein, humanDNAMi-2 Nucleosome Remodeling and Deacetylase ComplexNucleosomesPeptidesPoly Adenosine Diphosphate RiboseCHD4chromatin remodelingDNA binding proteinDNA damageHMG-boxnucleosomenucleosome remodeling deacetylase (NuRD)poly(ADP-ribose)

Identifiers

PMID26565020
PMCPMC4705410
OpenAlexW2226193377

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.