Evidence map›Paper›PMID 26563376›Full record

ArticleTumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine2016

Association of promoter polymorphisms of Fas -FasL genes with development of Chronic Myeloid Leukemia.

Prajitha Mohandas Edathara, Manjula Gorre, Sailaja Kagita, Sugunakar Vuree, Anuradha Cingeetham, Santhoshi Rani Nanchari, Phanni Bhushann Meka, Sandhya Annamaneni, Raghunadha Rao Digumarthi, Vishnupriya Satti

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Article in Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Prajitha Mohandas EdatharaDepartment of Genetics, Osmania University, Hyderabad, 500007, India.
Manjula GorreDepartment of Genetics, Osmania University, Hyderabad, 500007, India.
Sailaja KagitaHomi Bhabha Cancer Hospital and Research Centre, Visakhapatnam, 530053, India.
Sugunakar VureeDepartment of Genetics, Osmania University, Hyderabad, 500007, India.
Anuradha CingeethamDepartment of Genetics, Osmania University, Hyderabad, 500007, India.
Santhoshi Rani NanchariDepartment of Genetics, Osmania University, Hyderabad, 500007, India.
Phanni Bhushann MekaDepartment of Genetics, Osmania University, Hyderabad, 500007, India.
Sandhya AnnamaneniDepartment of Genetics, Osmania University, Hyderabad, 500007, India.
Raghunadha Rao DigumarthiHomi Bhabha Cancer Hospital and Research Centre, Visakhapatnam, 530053, India.
Vishnupriya SattiDepartment of Genetics, Osmania University, Hyderabad, 500007, India. sattivishnupriya@gmail.com.
Osmania University · INCancer Hospital and Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chronic myeloid leukemia (CML) is a monoclonal myeloproliferative disorder of hematopoietic stem cells (HSCs), characterized by reciprocal translocation, leading to the formation of BCR-ABL oncogene with constitutive tyrosine kinase (TK) activity. This oncogene is known to deregulate different downstream pathways which ultimately lead to cell proliferation, defective DNA repair, and inhibition of apoptosis. Fas (Fas cell surface death receptor) is a member of tumor necrosis factor (TNF) superfamily which interacts with its ligand, FasL, to initiate apoptosis. Promoter polymorphisms in Fas-FasL genes are known to influence the apoptotic signaling. Hence, the present study has been aimed to find out the association of the promoter polymorphisms in Fas and FasL genes with the development and progression of CML. Blood samples from 772 subjects (386 controls and 386 cases) were collected and genotyped for Fas-FasL gene polymorphisms through PCR-RFLP method. The association between SNPs and clinical outcome was analyzed using statistical softwares like SPSS version 20, SNPSTATs, and Haploview 2.1. The study revealed a significant association of Fas -670 G>A and FasL -844 T>C polymorphisms with the development of CML while Fas -670 AG was associated with accelerated phase. Combined risk analysis by taking the risk genotypes in cases and controls revealed a significant increase in CML risk with increase in number of risk genotypes (one risk genotype-OR 1.99 (1.44-2.76), p < 0.0001; two risk genotypes-OR 3.33 (1.91-5.81), p < 0.0001). Kaplan-Meier survival analysis of Fas -670 A>G and FasL -844 T>C showed reduced event-free survival in patients carrying the variant genotypes, Fas -670 GG, 32.363 ± 6.33, and FasL -844 CC, 33.489 ± 5.83, respectively. Our findings revealed a significant association of Fas -670 GG, FasL -844 TC, and CC genotypes with increased risk of CML.

Indexed as

Promoter Regions, GeneticAdultApoptosisDisease-Free SurvivalFas Ligand Proteinfas ReceptorFemaleGenetic Association StudiesGenetic Predisposition to DiseaseGenotypeHumansLeukemia, Myelogenous, Chronic, BCR-ABL PositiveMaleMiddle AgedPolymorphism, Single NucleotideRisk FactorsFASLG protein, humanFas Ligand ProteinFAS protein, humanfas ReceptorChronic Myeloid LeukemiaFasFas LPromoter polymorphism

Identifiers

PMID26563376
OpenAlexW2178046744

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.