Evidence map›Paper›PMID 26563375›Full record

ArticleTumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine2016

Association and interaction of NFKB1 rs28362491 insertion/deletion ATTG polymorphism and PPP1R13L and CD3EAP related to lung cancer risk in a Chinese population.

Jiaoyang Yin, Huiwen Wang, Ulla Vogel, Chunhong Wang, Wei Hou, Yegang Ma

Abstract read
PubMed Publisher
In one paragraph

Article in Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 2 pooled it
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 2 syntheses or guidelines pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
  4. Article
  5. Article
  6. Uncovering the Anti-Lung-Cancer Mechanisms of the Herbal Drug FDY2004 by Network Pharmacology.Evidence-based complementary and alternative medicine : eCAM · 2021
    Article
  7. Interaction between common variants ofAnnals of translational medicine · 2020
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Jiaoyang YinKey Laboratory of Environment and Population Health of Liaoning Education Ministry (Shenyang Medical College), Shenyang, 110034, Liaoning, People's Republic of China. yinjye@163.com.
Huiwen WangKey Laboratory of Environment and Population Health of Liaoning Education Ministry (Shenyang Medical College), Shenyang, 110034, Liaoning, People's Republic of China.
Ulla VogelNational Research Centre for the Working Environment, Lerso Parkalle 105, DK-2100, Copenhagen O, Denmark.
Chunhong WangKey Laboratory of Environment and Population Health of Liaoning Education Ministry (Shenyang Medical College), Shenyang, 110034, Liaoning, People's Republic of China.
Wei HouDepartment of Pathology, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, 100191, People's Republic of China.
Yegang MaDepartment of Thoracic Surgery, Liaoning Cancer Hospital, Shenyang, 110042, Liaoning, People's Republic of China.
Shenyang Medical College · CNLiaoning Cancer Hospital & Institute · CNNational Research Centre for the Working Environment · DKPeking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nuclear factor of kappa light polypeptide gene enhancer in B cells 1 (NFKB1) gene encodes p105 and p50 kD which are both subunits of the transcription factor NF-kB, involved in a wide variety of diseases and pathological states associated with inflammation, immunity, and tumorigenesis. The NFKB1 rs28362491 polymorphism in the promoter region (-94 insertion/deletion ATTG) has been associated with risk of various cancers. Our study aims were to evaluate the associations of NFKB1 rs28362491 polymorphism and interactions of this single-nucleotide polymorphism (SNP) and PPP1R13L and CD3EAP and smoking duration in relation to lung cancer risk in a Chinese population. The study population consisted of 544 Chinese lung cancer cases and 550 cancer-free matched (age, sex, and ethnicity) controls. No associations were found between NFKB1 rs28362491 and lung cancer risk. CD3EAP rs967591 was associated with increased lung cancer risk in the dominant model [OR (95 % CI) = 1.38 (1.05-1.80), P = 0.018]. The common haplotype containing PPP1R13L rs1970764(G), CD3EAP rs967591(A), and CD3EAP rs735482(C) was associated with lung cancer [adjusted OR (95 % CI) = 1.29 (1.03-1.62), P = 0.028]. Multifactor dimensionality reduction (MDR) analysis revealed two-way and three-way interactions between CD3EAP rs735482 and smoking and between NFKB1 rs28362491, PPP1R13L rs1970764, and smoking. In conclusion, we were able to reproduce previously found associations between PPP1R13L and CD3EAP polymorphisms and lung cancer risk in an increased study group, and we found interactions between NFKB1 rs28362491-PPP1R13L rs1970764 and smoking duration and between CD3EAP rs735482 and smoking duration. These results suggest that these genes and smoking are part of the same biological pathway leading to smoking-induced lung cancer.

Indexed as

CarcinogenesisFemaleGenetic Association StudiesGenetic Predisposition to DiseaseHaplotypesHumansINDEL MutationIntracellular Signaling Peptides and ProteinsLung NeoplasmsMaleNF-kappa B p50 SubunitPolymorphism, Single NucleotideRepressor ProteinsRisk FactorsRNA Polymerase ISmokingIntracellular Signaling Peptides and ProteinsNF-kappa B p50 SubunitNFKB1 protein, humanPOLR1G protein, humanPPP1R13L protein, humanRepressor ProteinsRNA Polymerase IChineseInteractionLung cancerNFKB1 rs28362491 and PPP1R13L and CD3EAPSingle-nucleotide polymorphisms

Identifiers

PMID26563375
OpenAlexW2460248363

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.