Evidence map›Paper›PMID 26563301›Full record

ArticleCurrent microbiology2016

Anti-cancer Parasporin Toxins are Associated with Different Environments: Discovery of Two Novel Parasporin 5-like Genes.

David R Ammons, John D Short, Jeffery Bailey, Gabriela Hinojosa, Lourdes Tavarez, Martha Salazar, Joanne N Rampersad

Abstract read
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In one paragraph

Article in Current microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Genetic Modification Approaches for ParasporinsMolecules (Basel, Switzerland) · 2021
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Complete Genome Sequence ofGenome announcements · 2017
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

David R AmmonsDepartment of Chemistry, The University of Texas-Pan American, 1201 W. University Drive, Edinburg, TX, 78539, USA.
John D ShortUniversity of Texas Health Science Center at San Antonio-Regional Academic Health Center, 1214 W. Schunior, Edinburg, TX, 78541, USA.
Jeffery BaileyDepartment of Chemistry, The University of Texas-Pan American, 1201 W. University Drive, Edinburg, TX, 78539, USA.
Gabriela HinojosaDepartment of Chemistry, The University of Texas-Pan American, 1201 W. University Drive, Edinburg, TX, 78539, USA.
Lourdes TavarezDepartment of Chemistry, The University of Texas-Pan American, 1201 W. University Drive, Edinburg, TX, 78539, USA.
Martha SalazarDepartment of Chemistry, The University of Texas-Pan American, 1201 W. University Drive, Edinburg, TX, 78539, USA.
Joanne N RampersadDepartment of Chemistry, The University of Texas-Pan American, 1201 W. University Drive, Edinburg, TX, 78539, USA. joanne.rampersadammons@utrgv.edu.
The University of Texas Rio Grande Valley · USThe University of Texas Health Science Center at San Antonio · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Cry toxins are primarily a family of insecticidal toxins produced by the bacterium Bacillus thuringiensis (Bt). However, some Cry toxins, called parasporins (PSs), are non-insecticidal and have been shown to differentially kill human cancer cells. Based on amino acid homology, there are currently six different classes of parasporins (PS1-6). It is not known what role parasporins play in nature, nor if certain PSs are associated with Bt found in particular environments. Herein, we present ten parasporin-containing isolates of Bt from the Caribbean island of Trinidad. Genes coding for PS1 and PS6 were found in isolates associated mainly with artificial aquatic environments (e.g., barrels with rain water), while Bt possessing two novel PS5-like genes (ps5-1 and ps5-2), were isolated from manure collected directly from the rectum of cattle. The amino acid sequences inferred from the two PS5-like genes were 51 % homologous to each other, while being only 41 or 45 % similar to PS5Aa1/Cry64Aa, the only reported member of the parasporin five class. The low level of amino acid homology between the two PS5-like genes and PS5Aa1 indicate that the two PS5-like genes may represent a new class of parasporins, or greatly expand the level of diversity within the current parasporin 5 class.

Indexed as

Genes, BacterialAnimalsAntineoplastic AgentsBacillus thuringiensisCattleEndotoxinsManureSequence Homology, Amino AcidTrinidad and TobagoWater MicrobiologyAntineoplastic AgentsEndotoxinsManureparasporin

Identifiers

PMID26563301
OpenAlexW2172867819

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.