Evidence map›Paper›PMID 26563275›Full record

ArticleTropical animal health and production2016

Novel SNPs in HSPB8 gene and their association with heat tolerance traits in Sahiwal indigenous cattle.

Nishant Verma, Ishwar Dayal Gupta, Archana Verma, Rakesh Kumar, Ramendra Das, M R Vineeth

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Article in Tropical animal health and production, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 25% of its field
1 · What the graph read from it

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3 · Its place in the literature

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7 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Nishant VermaDairy Cattle Breeding Division, Indian Council of Agricultural Research-National Dairy Research Institute, Karnal, Haryana, 132001, India. nish100verma@gmail.com.ORCID http://orcid.org/0000-0002-7175-2686
Ishwar Dayal GuptaDairy Cattle Breeding Division, Indian Council of Agricultural Research-National Dairy Research Institute, Karnal, Haryana, 132001, India.
Archana VermaDairy Cattle Breeding Division, Indian Council of Agricultural Research-National Dairy Research Institute, Karnal, Haryana, 132001, India.
Rakesh KumarDairy Cattle Breeding Division, Indian Council of Agricultural Research-National Dairy Research Institute, Karnal, Haryana, 132001, India.
Ramendra DasDairy Cattle Breeding Division, Indian Council of Agricultural Research-National Dairy Research Institute, Karnal, Haryana, 132001, India.
M R VineethDairy Cattle Breeding Division, Indian Council of Agricultural Research-National Dairy Research Institute, Karnal, Haryana, 132001, India.
Indian Council of Agricultural Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heat shock proteins (HSPs) are expressed in response to heat stress, and the polymorphism in HSP genes at single-nucleotide level has been reported to be associated with heat tolerance and production performance traits in cattle. HSPB8 gene has been mapped on Bos taurus autosome 17 (BTA-17) spanning nearly 13,252 bp and comprising three exons and two introns. The present study was conducted in Sahiwal cows (n = 108) reared in subtropical climate with the objectives to identify SNPs in all three exons and part of intron 1 of HSPB8 gene and to analyze their association with heat tolerance traits in Sahiwal cows. Respiration rate (RR) and rectal temperature (RT) were recorded once during probable extreme hours in different seasons or Temperature-Humidity Index (THI), i.e., winter, spring, and summer. Heat tolerance coefficient (HTC) was also calculated to check the adaptability of the animals during the period of heat stress. The comparative sequence analysis revealed a total two single-nucleotide polymorphisms (SNPs), i.e., g.507G>A in exon 1 and g.881T>C in intron 1 of HSPB8 gene. Out of these two identified SNPs, only one SNP, i.e., g.507G>A, was found to be significantly associated with heat tolerance indicator traits (RR, RT, and HTC) in Sahiwal cows. The perusal of results across different seasons showed the significant (P < 0.01) difference in RR, RT, and HTC between winter, spring, and summer seasons. RR, RT, and HTC were found to be significantly lower (P < 0.01) in GA as compared to GG genotype of g.507G>A SNP of HSPB8 gene. However, in case of another SNP, i.e., g.881T>C, located on intron 1, the RR, RT, and HTC were having non-significant association with the different genotypes, i.e., TT and TC. These findings may partly suggest that GA genotype of SNP g.507G>A of HSPB8 gene has a probable role in heat tolerance in Sahiwal cattle and can therefore be utilized as a marker in propagation of thermo-tolerance cattle in hot tropical and subtropical climate. Nevertheless, the involvement of other regulatory mechanisms cannot be overruled.

Indexed as

Hot TemperatureAdaptation, PhysiologicalAnimalsBase SequenceBody TemperatureCattleFemaleHSP90 Heat-Shock ProteinsIndiaMolecular Sequence DataPhenotypePolymorphism, Single NucleotideHSP90 Heat-Shock ProteinsHSPHSPB8SNP

Identifiers

PMID26563275
OpenAlexW2241479596

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.