Evidence map›Paper›PMID 26562302›Full record

ArticlePloS one2015

Mutational Hotspot of TET2, IDH1, IDH2, SRSF2, SF3B1, KRAS, and NRAS from Human Systemic Mastocytosis Are Not Conserved in Canine Mast Cell Tumors.

Eleonora Zorzan, Katia Hanssens, Mery Giantin, Mauro Dacasto, Patrice Dubreuil

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  8. Epigenetic Mechanisms in Canine Cancer.Frontiers in oncology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Eleonora ZorzanDepartment of Comparative Biomedicine and Food Science, University of Padua, Legnaro, Padua, Italy.
Katia HanssensInserm U1068, Centre de Recherche en Cancérologie de Marseille, Signalisation, Hematopoiesis and Mechanisms of Oncogenesis, Centre de référence des mastocytoses, Institut Paoli Calmettes, CNRS, Aix Marseille Université, Marseille, France.
Mery GiantinDepartment of Comparative Biomedicine and Food Science, University of Padua, Legnaro, Padua, Italy.
Mauro DacastoDepartment of Comparative Biomedicine and Food Science, University of Padua, Legnaro, Padua, Italy.
Patrice DubreuilInserm U1068, Centre de Recherche en Cancérologie de Marseille, Signalisation, Hematopoiesis and Mechanisms of Oncogenesis, Centre de référence des mastocytoses, Institut Paoli Calmettes, CNRS, Aix Marseille Université, Marseille, France.
University of Padua · ITCentre National de la Recherche Scientifique · FRInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionBoth canine cutaneous mast cell tumor (MCT) and human systemic mastocytosis (SM) are characterized by abnormal proliferation and accumulation of mast cells in tissues and, frequently, by the presence of activating mutations in the receptor tyrosine kinase V-Kit Hardy-Zuckerman 4 Feline Sarcoma Viral Oncogene Homolog (c-KIT), albeit at different incidence (>80% in SM and 10-30% in MCT). In the last few years, it has been discovered that additional mutations in other genes belonging to the methylation system, the splicing machinery and cell signaling, contribute, with c-KIT, to SM pathogenesis and/or phenotype. In the present study, the mutational profile of the Tet methylcytosine dioxygenase 2 (TET2), the isocitrate dehydrogenases 1 and 2 (IDH1 and IDH2), the serine/arginine-rich splicing factor 2 (SRSF2), the splicing factor 3b subunit 1 (SF3B1), the Kirsten rat sarcoma viral oncogene homolog (KRAS) and the neuroblastoma RAS viral oncogene homolog (NRAS), commonly mutated in human myeloid malignancies and mastocytosis, was investigated in canine MCTs.

methodsUsing the Sanger sequencing method, a cohort of 75 DNA samples extracted from MCT biopsies already investigated for c-KIT mutations were screened for the "human-like" hot spot mutations of listed genes.

resultsNo mutations were ever identified except for TET2 even if with low frequency (2.7%). In contrast to what is observed in human TET2 no frame-shift mutations were found in MCT samples.

conclusionResults obtained in this preliminary study are suggestive of a substantial difference between human SM and canine MCT if we consider some target genes known to be involved in the pathogenesis of human SM.

Indexed as

MutationAmino Acid SequenceAnimalsDioxygenasesDNA-Binding ProteinsDog DiseasesDogsGene FrequencyGenetic Predisposition to DiseaseGTP PhosphohydrolasesHumansIsocitrate DehydrogenaseMast CellsMastocytosis, SystemicMembrane ProteinsMolecular Sequence DataDioxygenasesDNA-Binding ProteinsGTP PhosphohydrolasesIDH1 protein, humanIDH2 protein, humanIsocitrate DehydrogenaseKRAS protein, humanMembrane ProteinsNRAS protein, humanNuclear ProteinsPhosphoproteinsProto-Oncogene ProteinsProto-Oncogene Proteins p21(ras)RibonucleoproteinsRibonucleoprotein, U2 Small NuclearRNA Splicing FactorsSerine-Arginine Splicing FactorsSF3B1 protein, humanSRSF2 protein, humanTET2 protein, human

Identifiers

PMID26562302
PMCPMC4643045
OpenAlexW2175352883

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.