Evidence map›Paper›PMID 26562079›Full record

ArticleGenes and immunity

Survival analysis and microarray profiling identify Cd40 as a candidate for the Salmonella susceptibility locus, Ity5.

S C Beatty, K E Yuki, M M Eva, S Dauphinee, L Larivière, S M Vidal, D Malo

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Genes and immunity. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Complex genetics architecture contributes to Salmonella resistance in AcB60 mice.Mammalian genome : official journal of the International Mammalian Genome Society · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

S C BeattyDepartment of Human Genetics, McGill University, Montréal, Quebec Canada.ORCID http://orcid.org/0000-0001-6819-7071
K E YukiDepartment of Human Genetics, McGill University, Montréal, Quebec Canada.
M M EvaDepartment of Human Genetics, McGill University, Montréal, Quebec Canada.
S DauphineeDepartment of Human Genetics, McGill University, Montréal, Quebec Canada.
L LarivièreComplex Traits Group of the McGill Life Sciences Complex, McGill University, Montréal, Quebec Canada.
S M VidalDepartment of Human Genetics, McGill University, Montréal, Quebec Canada.
D MaloDepartment of Human Genetics, McGill University, Montréal, Quebec Canada.
McGill Genome Centre · CAMcGill University · CA

Funding

Canadian Institutes of Health Research MOP-15461Canadian Institutes of Health Research MOP-89821
6 · The paper itself

Abstract

The outcome of infection with Salmonella Typhimurium in mouse models of human typhoid fever is dependent upon a coordinated complex immune response. A panel of recombinant congenic strains (RCS) derived from reciprocal backcross of A/J and C57BL/6J mice was screened for their susceptibility to Salmonella infection and two susceptibility loci, Ity4 (Immunity to Typhimurium locus 4) and Ity5, were identified. We validated Ity5 in a genetic environment free of the impact of Ity4 using a cross between A/J and 129S6. Using a time-series analysis of genome-wide transcription during infection, comparing A/J with AcB60 mice having a C57BL/6J-derived Ity5 interval, we have identified the differential expression of the positional candidate gene Cd40, Cd40-associated signaling pathways, and the differential expression of numerous genes expressed in neutrophils. CD40 is known to coordinate T cell-dependent B-cell responses and myeloid cell activation. In fact, CD40 signaling is altered in A/J mice as seen by impaired IgM upregulation during infection, decreased Ig class switching, neutropenia, reduced granulocyte recruitment in response to infection and inflammation, and decreased ERK1/2 activity. These results suggest that altered CD40 signaling and granulocyte recruitment in response to infection are responsible for the Ity5-associated Salmonella susceptibility of A/J mice.

Indexed as

Disease Models, AnimalMiceAnimalsCation Transport ProteinsCD40 AntigensCrosses, GeneticGene Expression ProfilingGenetic Predisposition to DiseaseImmunoglobulinsMAP Kinase Signaling SystemMice, Inbred C57BLNatural Resistance-associated Macrophage Protein 1Neutrophil ActivationSalmonella Infections, AnimalCation Transport ProteinsCD40 AntigensImmunoglobulinsNatural Resistance-associated Macrophage Protein 1

Identifiers

PMID26562079
OpenAlexW2197468298

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.