Evidence map›Paper›PMID 26561564›Full record

ArticlePlant physiology2016

Differential Roles of Two Homologous Cyclin-Dependent Kinase Inhibitor Genes in Regulating Cell Cycle and Innate Immunity in Arabidopsis.

Safae Hamdoun, Chong Zhang, Manroop Gill, Narender Kumar, Michelle Churchman, John C Larkin, Ashley Kwon, Hua Lu

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
7.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. International journal of molecular sciences · 2024
    Article
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  6. HPlant, cell & environment · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Safae HamdounDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland 21250 (S.H., C.Z., M.G., A.K., H.L.); andDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803 (N.K., M.C., J.C.L.).
Chong ZhangDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland 21250 (S.H., C.Z., M.G., A.K., H.L.); andDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803 (N.K., M.C., J.C.L.).
Manroop GillDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland 21250 (S.H., C.Z., M.G., A.K., H.L.); andDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803 (N.K., M.C., J.C.L.).
Narender KumarDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland 21250 (S.H., C.Z., M.G., A.K., H.L.); andDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803 (N.K., M.C., J.C.L.).ORCID http://orcid.org/0000-0002-2009-3158
Michelle ChurchmanDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland 21250 (S.H., C.Z., M.G., A.K., H.L.); andDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803 (N.K., M.C., J.C.L.).
John C LarkinDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland 21250 (S.H., C.Z., M.G., A.K., H.L.); andDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803 (N.K., M.C., J.C.L.).
Ashley KwonDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland 21250 (S.H., C.Z., M.G., A.K., H.L.); andDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803 (N.K., M.C., J.C.L.).ORCID http://orcid.org/0000-0001-9635-7482
Hua LuDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland 21250 (S.H., C.Z., M.G., A.K., H.L.); andDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803 (N.K., M.C., J.C.L.) hualu@umbc.edu.ORCID http://orcid.org/0000-0002-7496-3200
Louisiana State University · USUniversity of Maryland, Baltimore County · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Precise cell-cycle control is critical for plant development and responses to pathogen invasion. Two homologous cyclin-dependent kinase inhibitor genes, SIAMESE (SIM) and SIM-RELATED 1 (SMR1), were recently shown to regulate Arabidopsis (Arabidopsis thaliana) defense based on phenotypes conferred by a sim smr1 double mutant. However, whether these two genes play differential roles in cell-cycle and defense control is unknown. In this report, we show that while acting synergistically to promote endoreplication, SIM and SMR1 play different roles in affecting the ploidy of trichome and leaf cells, respectively. In addition, we found that the smr1-1 mutant, but not sim-1, was more susceptible to a virulent Pseudomonas syringae strain, and this susceptibility could be rescued by activating salicylic acid (SA)-mediated defense. Consistent with these results, smr1-1 partially suppressed the dwarfism, high SA levels, and cell death phenotypes in acd6-1, a mutant used to gauge the change of defense levels. Thus, SMR1 functions partly through SA in defense control. The differential roles of SIM and SMR1 are due to differences in temporal and spatial expression of these two genes in Arabidopsis tissues and in response to P. syringae infection. In addition, flow-cytometry analysis of plants with altered SA signaling revealed that SA is necessary, but not sufficient, to change cell-cycle progression. We further found that a mutant with three CYCD3 genes disrupted also compromised disease resistance to P. syringae. Together, this study reveals differential roles of two homologous cyclin-dependent kinase inhibitors in regulating cell-cycle progression and innate immunity in Arabidopsis and provides insights into the importance of cell-cycle control during host-pathogen interactions.

Indexed as

ArabidopsisArabidopsis ProteinsCell CycleCell Cycle ProteinsCyclinsDisease ResistanceGene Expression Regulation, PlantHost-Pathogen InteractionsImmunity, InnateNuclear ProteinsPlant DiseasesPlant LeavesPlants, Genetically ModifiedPloidiesPseudomonas syringaeSalicylic AcidArabidopsis ProteinsAt3g10525 protein, ArabidopsisCell Cycle ProteinsCycD3 protein, ArabidopsisCyclinsNuclear ProteinsSalicylic AcidSIAMESE protein, Arabidopsis

Identifiers

PMID26561564
PMCPMC4704592
OpenAlexW2150433156

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.