Evidence map›Paper›PMID 26560096›Full record

ReviewAntioxidants & redox signaling2015

Insights into the Role of Chemokines, Damage-Associated Molecular Patterns, and Lymphocyte-Derived Mediators from Computational Models of Trauma-Induced Inflammation.

Rami A Namas, Qi Mi, Rajaie Namas, Khalid Almahmoud, Akram M Zaaqoq, Othman Abdul-Malak, Nabil Azhar, Judy Day, Andrew Abboud, Ruben Zamora and 2 more

Open access · greenAbstract readReview
In one paragraph

Review in Antioxidants & redox signaling, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 2 pooled it
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 2 syntheses or guidelines pooled it, 80 citations in OpenAlex.

  1. Pooled it
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  13. What's next for computational systems biology?Frontiers in systems biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Rami A Namas1 Department of Surgery, University of Pittsburgh , Pittsburgh, Pennsylvania.
Qi Mi3 Department of Sports Medicine and Nutrition, University of Pittsburgh , Pittsburgh, Pennsylvania.
Rajaie Namas4 Department of Internal Medicine, Division of Rheumatology, University of Michigan , Ann Arbor, Michigan.
Khalid Almahmoud1 Department of Surgery, University of Pittsburgh , Pittsburgh, Pennsylvania.
Akram M Zaaqoq5 Department of Critical Care Medicine, University of Pittsburgh , Pennsylvania.
Othman Abdul-Malak1 Department of Surgery, University of Pittsburgh , Pittsburgh, Pennsylvania.
Nabil Azhar6 Department of Computational and Systems Biology, University of Pittsburgh , Pittsburgh, Pennsylvania.
Judy Day7 Department of Mathematics, University of Tennessee , Knoxville, Tennessee.
Andrew Abboud1 Department of Surgery, University of Pittsburgh , Pittsburgh, Pennsylvania.
Ruben Zamora1 Department of Surgery, University of Pittsburgh , Pittsburgh, Pennsylvania.
Timothy R Billiar1 Department of Surgery, University of Pittsburgh , Pittsburgh, Pennsylvania.
Yoram Vodovotz1 Department of Surgery, University of Pittsburgh , Pittsburgh, Pennsylvania.
University of Pittsburgh · USMcGowan Institute for Regenerative Medicine · USUniversity of Michigan–Ann Arbor · USUniversity of Tennessee at Knoxville · US

Funding

Multi-Center Group to Study Acute Liver Failure in ChildU01DK072146 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SQUIRES, ROBERT H · 2005 to 2014
$23.2M
Regulation of Intestinal Mucosal Injury & Repair After Trauma/Hemorrhagic ShockP50GM053789 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BILLIAR, TIMOTHY R · 1997 to 2013
$18.0M
Systems Engineering of Pheresis Intervention for SepsisR01HL080926 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KELLUM, JOHN A · 2005 to 2009
$6.8M
Systems biology approach to MAPK regulation of malaria infection in A. stephensiR01AI080799 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LUCKHART, SHIRLEY, VODOVOTZ, YORAM · 2009 to 2013
$3.4M
Hybrid Model of Vocal Inflammation and Tissue MobilizationR01DC008290 · NIDCD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI VERDOLINI, KATHERINE · 2007 to 2011
$2.8M
Metabolic-Inflammatory Systems in Irreversible ShockR01HL076157 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PUYANA, JUAN CARLOS · 2004 to 2007
$1.4M
Mathematical Modeling of Inflammation in ARDSR33HL089082 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI VODOVOTZ, YORAM · 2008 to 2010
$1.3M
Modeling the acute inflammatory responseR01GM067240 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CLERMONT, GILLES · 2002 to 2005
$1.3M
NHLBI NIH HHS R01HL080926NHLBI NIH HHS R01HL76157NHLBI NIH HHS R33HL089082NIAID NIH HHS R01AI080799NIDCD NIH HHS R01DC008290NIDDK NIH HHS UO1DK072146NIGMS NIH HHS P50GM53789NIGMS NIH HHS R01GM67240
6 · The paper itself

Abstract

significanceTraumatic injury elicits a complex, dynamic, multidimensional inflammatory response that is intertwined with complications such as multiple organ dysfunction and nosocomial infection. The complex interplay between inflammation and physiology in critical illness remains a challenge for translational research, including the extrapolation to human disease from animal models. RECENT ADVANCES: Over the past decade, we and others have attempted to decipher the biocomplexity of inflammation in these settings of acute illness, using computational models to improve clinical translation. In silico modeling has been suggested as a computationally based framework for integrating data derived from basic biology experiments as well as preclinical and clinical studies. CRITICAL ISSUES: Extensive studies in cells, mice, and human blunt trauma patients have led us to suggest (i) that while an adequate level of inflammation is required for healing post-trauma, inflammation can be harmful when it becomes self-sustaining via a damage-associated molecular pattern/Toll-like receptor-driven feed-forward circuit; (ii) that chemokines play a central regulatory role in driving either self-resolving or self-maintaining inflammation that drives the early activation of both classical innate and more recently recognized lymphoid pathways; and (iii) the presence of multiple thresholds and feedback loops, which could significantly affect the propagation of inflammation across multiple body compartments. FUTURE DIRECTIONS: These insights from data-driven models into the primary drivers and interconnected networks of inflammation have been used to generate mechanistic computational models. Together, these models may be used to gain basic insights as well as serving to help define novel biomarkers and therapeutic targets.

Indexed as

AnimalsChemokinesClinical Trials as TopicComputer SimulationHumansLymphocytesMiceModels, BiologicalTranslational Research, BiomedicalWounds and InjuriesChemokines

Identifiers

PMID26560096
PMCPMC4685502
OpenAlexW2224296977

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.