Evidence map›Paper›PMID 26557124›Full record

ArticleFrontiers in plant science2015

TOR-inhibitor insensitive-1 (TRIN1) regulates cotyledons greening in Arabidopsis.

Linxuan Li, Yun Song, Kai Wang, Pan Dong, Xueyan Zhang, Fuguang Li, Zhengguo Li, Maozhi Ren

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Overexpression of Nta-miR6155 confers resistance toFrontiers in plant science · 2023
    Article
  5. Article
  6. Review
  7. Target of Rapamycin Regulates Photosynthesis and Cell Growth inInternational journal of molecular sciences · 2022
    Article
  8. Article
  9. Article
  10. Contributions of TOR Signaling on Photosynthesis.International journal of molecular sciences · 2021
    Review
  11. Article
  12. Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Review
  18. The Importance of TOR Kinase in Plant Development.Frontiers in plant science · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Linxuan LiSchool of Life Sciences, Chongqing University Chongqing, China.
Yun SongInstitute of Cotton Research, Chinese Academy of Agricultural Sciences, the State Key Laboratory of Cotton Biology Henan, China.
Kai WangSchool of Life Sciences, Chongqing University Chongqing, China.
Pan DongSchool of Life Sciences, Chongqing University Chongqing, China.
Xueyan ZhangInstitute of Cotton Research, Chinese Academy of Agricultural Sciences, the State Key Laboratory of Cotton Biology Henan, China.
Fuguang LiInstitute of Cotton Research, Chinese Academy of Agricultural Sciences, the State Key Laboratory of Cotton Biology Henan, China.
Zhengguo LiSchool of Life Sciences, Chongqing University Chongqing, China.
Maozhi RenSchool of Life Sciences, Chongqing University Chongqing, China.
Chongqing University · CNCotton Research Institute · CNChinese Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Target of Rapamycin (TOR) is an eukaryotic protein kinase and evolutionally conserved from the last eukaryotic common ancestor (LECA) to humans. The growing evidences have shown that TOR signaling acts as a central controller of cell growth and development. The downstream effectors of TOR have been well-identified in yeast and animals by using the immunosuppression agent rapamycin. However, less is known about TOR in plants. This is largely due to the fact that plants are insensitive to rapamycin. In this study, AZD8055 (AZD), the novel ATP-competitive inhibitor of TOR, was employed to decipher the downstream effectors of TOR in Arabidopsis. One AZD insensitive mutant, T O R - i nhibitor i n sensitive- 1 (trin1), was screened from 10,000 EMS-induced mutation seeds. The cotyledons of trin1 can turn green when its seeds were germinated on ½ MS medium supplemented with 2 μM AZD, whereas the cotyledons greening of wild-type (WT) can be completely blocked at this concentration. Through genetic mapping, TRIN1 was mapped onto the long arm of chromosome 2, between markers SGCSNP26 and MI277. Positional cloning revealed that TRIN1 was an allele of ABI4, which encoded an ABA-regulated AP2 domain transcription factor. Plants containing P35S::TRIN1 or P35S::TRIN1-GUS were hypersensitive to AZD treatment and displayed the opposite phenotype observed in trin1. Importantly, GUS signaling was significantly enhanced in P35S::TRIN1-GUS transgenic plants in response to AZD treatment, indicating that suppression of TOR resulted in the accumulation of TRIN1. These observations revealed that TOR controlled seed-to-seedling transition by negatively regulating the stability of TRIN1 in Arabidopsis. For the first time, TRIN1, the downstream effector of TOR signaling, was identified through a chemical genetics approach.

Indexed as

Arabidopsiscotyledons greeningTORTOR kinase inhibitorsTRIN1

Identifiers

PMID26557124
PMCPMC4617058
OpenAlexW2179514904

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.