Evidence map›Paper›PMID 26556930›Full record

ArticlePublic health reports (Washington, D.C. : 1974)

Representativeness of Tuberculosis Genotyping Surveillance in the United States, 2009-2010.

Emma B Shak, Anne Marie France, Lauren Cowan, Angela M Starks, Juliana Grant

Open access · bronzeAbstract read
In one paragraph

Article in Public health reports (Washington, D.C. : 1974). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 3 citations in OpenAlex.

  1. Pooled it
  2. Design and Implementation of Data Exchange Formats for Molecular Detection of Drug-Resistant Tuberculosis.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2019
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Emma B ShakCenters for Disease Control and Prevention, Scientific Education and Professional Development Program Office, Atlanta, GA ; Centers for Disease Control and Prevention, Division of Tuberculosis Elimination, Atlanta, GA.
Anne Marie FranceCenters for Disease Control and Prevention, Division of Tuberculosis Elimination, Atlanta, GA.
Lauren CowanCenters for Disease Control and Prevention, Division of Tuberculosis Elimination, Atlanta, GA.
Angela M StarksCenters for Disease Control and Prevention, Division of Tuberculosis Elimination, Atlanta, GA.
Juliana GrantCenters for Disease Control and Prevention, Division of Tuberculosis Elimination, Atlanta, GA.
Centers for Disease Control and Prevention · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genotyping of Mycobacterium tuberculosis isolates contributes to tuberculosis (TB) control through detection of possible outbreaks. However, 20% of U.S. cases do not have an isolate for testing, and 10% of cases with isolates do not have a genotype reported. TB outbreaks in populations with incomplete genotyping data might be missed by genotyping-based outbreak detection. Therefore, we assessed the representativeness of TB genotyping data by comparing characteristics of cases reported during January 1, 2009-December 31, 2010, that had a genotype result with those cases that did not. Of 22,476 cases, 14,922 (66%) had a genotype result. Cases without genotype results were more likely to be patients <19 years of age, with unknown HIV status, of female sex, U.S.-born, and with no recent history of homelessness or substance abuse. Although cases with a genotype result are largely representative of all reported U.S. TB cases, outbreak detection methods that rely solely on genotyping data may underestimate TB transmission among certain groups.

Indexed as

AdolescentAdultAgedChildChild, PreschoolDisease OutbreaksEpidemiological MonitoringFemaleGenotypeHumansMaleMiddle AgedMycobacterium tuberculosisTuberculosisUnited States

Identifiers

PMID26556930
PMCPMC4612167
OpenAlexW2415693902

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.