Evidence map›Paper›PMID 26556796›Full record

ArticlePlant physiology2016

ZINC FINGER OF ARABIDOPSIS THALIANA12 (ZAT12) Interacts with FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR (FIT) Linking Iron Deficiency and Oxidative Stress Responses.

Cham Thi Tuyet Le, Tzvetina Brumbarova, Rumen Ivanov, Claudia Stoof, Eva Weber, Julia Mohrbacher, Claudia Fink-Straube, Petra Bauer

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed, 1 pooled it
16.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 1 synthesis or guideline pooled it, 165 citations in OpenAlex.

  1. Pooled it
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  16. Plants (Basel, Switzerland) · 2023
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  18. The CPlant biotechnology journal · 2023
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19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Cham Thi Tuyet LeDepartment of Biosciences-Plant Biology, Saarland University, D-66123 Saarbruecken, Germany (C.T.T., T.B., R.I., E.W., J.M., P.B.);Institute of Botany (T.B., R.I., C.S., P.B.) and Cluster of Excellence on Plant Sciences (P.B.), Heinrich-Heine University, D-40225 Duesseldorf, Germany; andLeibniz Institute for New Materials, D-66123 Saarbruecken, Germany (C.F.-S.).
Tzvetina BrumbarovaDepartment of Biosciences-Plant Biology, Saarland University, D-66123 Saarbruecken, Germany (C.T.T., T.B., R.I., E.W., J.M., P.B.);Institute of Botany (T.B., R.I., C.S., P.B.) and Cluster of Excellence on Plant Sciences (P.B.), Heinrich-Heine University, D-40225 Duesseldorf, Germany; andLeibniz Institute for New Materials, D-66123 Saarbruecken, Germany (C.F.-S.).
Rumen IvanovDepartment of Biosciences-Plant Biology, Saarland University, D-66123 Saarbruecken, Germany (C.T.T., T.B., R.I., E.W., J.M., P.B.);Institute of Botany (T.B., R.I., C.S., P.B.) and Cluster of Excellence on Plant Sciences (P.B.), Heinrich-Heine University, D-40225 Duesseldorf, Germany; andLeibniz Institute for New Materials, D-66123 Saarbruecken, Germany (C.F.-S.).
Claudia StoofDepartment of Biosciences-Plant Biology, Saarland University, D-66123 Saarbruecken, Germany (C.T.T., T.B., R.I., E.W., J.M., P.B.);Institute of Botany (T.B., R.I., C.S., P.B.) and Cluster of Excellence on Plant Sciences (P.B.), Heinrich-Heine University, D-40225 Duesseldorf, Germany; andLeibniz Institute for New Materials, D-66123 Saarbruecken, Germany (C.F.-S.).
Eva WeberDepartment of Biosciences-Plant Biology, Saarland University, D-66123 Saarbruecken, Germany (C.T.T., T.B., R.I., E.W., J.M., P.B.);Institute of Botany (T.B., R.I., C.S., P.B.) and Cluster of Excellence on Plant Sciences (P.B.), Heinrich-Heine University, D-40225 Duesseldorf, Germany; andLeibniz Institute for New Materials, D-66123 Saarbruecken, Germany (C.F.-S.).ORCID http://orcid.org/0000-0001-8703-8439
Julia MohrbacherDepartment of Biosciences-Plant Biology, Saarland University, D-66123 Saarbruecken, Germany (C.T.T., T.B., R.I., E.W., J.M., P.B.);Institute of Botany (T.B., R.I., C.S., P.B.) and Cluster of Excellence on Plant Sciences (P.B.), Heinrich-Heine University, D-40225 Duesseldorf, Germany; andLeibniz Institute for New Materials, D-66123 Saarbruecken, Germany (C.F.-S.).
Claudia Fink-StraubeDepartment of Biosciences-Plant Biology, Saarland University, D-66123 Saarbruecken, Germany (C.T.T., T.B., R.I., E.W., J.M., P.B.);Institute of Botany (T.B., R.I., C.S., P.B.) and Cluster of Excellence on Plant Sciences (P.B.), Heinrich-Heine University, D-40225 Duesseldorf, Germany; andLeibniz Institute for New Materials, D-66123 Saarbruecken, Germany (C.F.-S.).
Petra BauerDepartment of Biosciences-Plant Biology, Saarland University, D-66123 Saarbruecken, Germany (C.T.T., T.B., R.I., E.W., J.M., P.B.);Institute of Botany (T.B., R.I., C.S., P.B.) and Cluster of Excellence on Plant Sciences (P.B.), Heinrich-Heine University, D-40225 Duesseldorf, Germany; andLeibniz Institute for New Materials, D-66123 Saarbruecken, Germany (C.F.-S.) petra.bauer@uni-duesseldorf.de.
Cluster of Excellence on Plant Sciences · DELeibniz-Institute for New Materials · DESaarland University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants grown under iron (Fe)-deficient conditions induce a set of genes that enhance the efficiency of Fe uptake by the roots. In Arabidopsis (Arabidopsis thaliana), the central regulator of this response is the basic helix-loop-helix transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR (FIT). FIT activity is regulated by protein-protein interactions, which also serve to integrate external signals that stimulate and possibly inhibit Fe uptake. In the search of signaling components regulating FIT function, we identified ZINC FINGER OF ARABIDOPSIS THALIANA12 (ZAT12), an abiotic stress-induced transcription factor. ZAT12 interacted with FIT, dependent on the presence of the ethylene-responsive element-binding factor-associated amphiphilic repression motif. ZAT12 protein was found expressed in the root early differentiation zone, where its abundance was modulated in a root layer-specific manner. In the absence of ZAT12, FIT expression was upregulated, suggesting a negative effect of ZAT12 on Fe uptake. Consistently, zat12 loss-of-function mutants had higher Fe content than the wild type at sufficient Fe. We found that under Fe deficiency, hydrogen peroxide (H2O2) levels were enhanced in a FIT-dependent manner. FIT protein, in turn, was stabilized by H2O2 but only in the presence of ZAT12, showing that H2O2 serves as a signal for Fe deficiency responses. We propose that oxidative stress-induced ZAT12 functions as a negative regulator of Fe acquisition. A model where H2O2 mediates the negative regulation of plant responses to prolonged stress might be applicable to a variety of stress conditions.

Indexed as

ArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsGene Expression Regulation, PlantHydrogen PeroxideIronLeupeptinsMutationOxidative StressPlants, Genetically ModifiedProtein Interaction Domains and MotifsTranscription FactorsArabidopsis ProteinsBasic Helix-Loop-Helix Proteinsbenzyloxycarbonylleucyl-leucyl-leucine aldehydeFIT1 protein, ArabidopsisHydrogen PeroxideIronLeupeptinsTranscription FactorsZAT12 protein, Arabidopsis

Identifiers

PMID26556796
PMCPMC4704599
OpenAlexW2202008050

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.