Evidence map›Paper›PMID 26554009›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

Choosing experiments to accelerate collective discovery.

Andrey Rzhetsky, Jacob G Foster, Ian T Foster, James A Evans

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. NIH funding and the pursuit of edge science.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Pooled it
  2. Article
  3. Structure of scientific knowledge flows to intergovernmental organizations.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. The dynamics of higher-order novelties.Nature communications · 2025
    Article
  10. Article
  11. Article
  12. Review
  13. Idea engines: Unifying innovation & obsolescence from markets & genetic evolution to science.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Interacting innovation processes.Scientific reports · 2023
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Andrey RzhetskyDepartments of Medicine and Human Genetics, University of Chicago, Chicago, IL 60637; Computation Institute, University of Chicago and Argonne National Laboratory, Chicago, IL 60637; Institute of Genomic and Systems Biology, University of Chicago, Chicago, IL 60637; arzhetsky@uchicago.edu jevans@uchicago.edu.
Jacob G FosterDepartment of Sociology, University of California, Los Angeles, CA 90095;
Ian T FosterComputation Institute, University of Chicago and Argonne National Laboratory, Chicago, IL 60637; Mathematics and Computer Science Division, Argonne National Laboratory, Argonne, IL 60637;
James A EvansComputation Institute, University of Chicago and Argonne National Laboratory, Chicago, IL 60637; Department of Sociology, University of Chicago, Chicago, IL 60637 arzhetsky@uchicago.edu jevans@uchicago.edu.ORCID http://orcid.org/0000-0001-9838-0707

Funding

Modeling the temporal succession of phenotypes & environnnental cuesP50MH094267 · NIMH · UNIVERSITY OF CHICAGO · PI RZHETSKY, ANDREY · 2011 to 2015
$10.2M
MAPGen Knowledge Base (MAPGenKB) and Coordination CenterU01HL108634 · NHLBI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI CRANDALL, EDWARD DAVID, ZHOU, XIANGHONG JASMINE · 2011 to 2015
$5.3M
NHLBI NIH HHS U01 HL108634NHLBI NIH HHS U01HL108634-01NIMH NIH HHS 1P50MH094267NIMH NIH HHS P50 MH094267
6 · The paper itself

Abstract

A scientist's choice of research problem affects his or her personal career trajectory. Scientists' combined choices affect the direction and efficiency of scientific discovery as a whole. In this paper, we infer preferences that shape problem selection from patterns of published findings and then quantify their efficiency. We represent research problems as links between scientific entities in a knowledge network. We then build a generative model of discovery informed by qualitative research on scientific problem selection. We map salient features from this literature to key network properties: an entity's importance corresponds to its degree centrality, and a problem's difficulty corresponds to the network distance it spans. Drawing on millions of papers and patents published over 30 years, we use this model to infer the typical research strategy used to explore chemical relationships in biomedicine. This strategy generates conservative research choices focused on building up knowledge around important molecules. These choices become more conservative over time. The observed strategy is efficient for initial exploration of the network and supports scientific careers that require steady output, but is inefficient for science as a whole. Through supercomputer experiments on a sample of the network, we study thousands of alternatives and identify strategies much more efficient at exploring mature knowledge networks. We find that increased risk-taking and the publication of experimental failures would substantially improve the speed of discovery. We consider institutional shifts in grant making, evaluation, and publication that would help realize these efficiencies.

Indexed as

ResearchScienceHumansPublicationsQualitative ResearchRisk-Takingcomplex networkscomputational biologyinnovationscience of sciencesociology of science

Identifiers

PMID26554009
PMCPMC4664375

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.