Evidence map›Paper›PMID 26553552›Full record

ArticleJournal of applied genetics2016

Age-related methylation profiles of equine blood leukocytes in the RNASEL locus.

T Ząbek, E Semik, T Szmatoła, B Oklejewicz, A Fornal, M Bugno-Poniewierska

Abstract read
In one paragraph

Article in Journal of applied genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

T ZąbekNational Research Institute of Animal Production, Krakowska 1, 32-083, Balice, Poland. tomasz.zabek@izoo.krakow.pl.
E SemikNational Research Institute of Animal Production, Krakowska 1, 32-083, Balice, Poland.
T SzmatołaNational Research Institute of Animal Production, Krakowska 1, 32-083, Balice, Poland.
B OklejewiczCentre of Applied Biotechnology and Basic Sciences, University of Rzeszow, Sokołowska 26, 36-100, Kolbuszowa, Poland.
A FornalNational Research Institute of Animal Production, Krakowska 1, 32-083, Balice, Poland.
M Bugno-PoniewierskaNational Research Institute of Animal Production, Krakowska 1, 32-083, Balice, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methylation profiles across three CpG islands of the RNASEL gene were determined in blood leukocyte samples of Anglo-Arabian and Hucul horses. Bisulfite sequencing revealed hypomethylated state of the RNASEL promoter coinciding with methylated CpG island placed inside the gene. Several CpG sites were identified for which the methylation state was influenced by DNA polymorphism. Two of them showed monoallelic methylation. One of the CpG sites revealed functional polymorphism. A number of partially methylated CpG sites have been observed in the promoter area of RNASEL, which were used for the comparison of breed- and age-related effects. Clone bisulfite sequencing of blood leukocyte samples collected at different ages from particular individuals of AA and HC breeds and, also, BSPCR sequencing of 50 samples of juvenile and old AA and HC horses revealed increased methylation in particular CpG sites during aging. The age-related heterogeneity of white blood cells was hypothesized as being one of the potential causes of observed variability of methylation profiles in the RNASEL promoter.

Indexed as

AgingDNA MethylationAnimalsBreedingCpG IslandsEndoribonucleasesEpigenesis, GeneticFemaleHorsesLeukocytesMalePolymorphism, GeneticPromoter Regions, GeneticSequence Analysis, DNA2-5A-dependent ribonucleaseEndoribonucleasesAgingDNA methylationHorsesLeukocytesRNASEL

Identifiers

PMID26553552
PMCPMC4963465

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.