Evidence map›Paper›PMID 26553054›Full record

ReviewJournal of gastroenterology2016

Regulation of virulence: the rise and fall of gastrointestinal pathogens.

Sho Kitamoto, Hiroko Nagao-Kitamoto, Peter Kuffa, Nobuhiko Kamada

Open access · bronzeAbstract readReview
In one paragraph

Review in Journal of gastroenterology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 79 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Comprehensive analysis ofGut microbes · 2025
    Article
  7. mBio · 2025
    Article
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. The oral-gut axis: a missing piece in the IBD puzzle.Inflammation and regeneration · 2023
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sho KitamotoDivision of Gastroenterology, Department of Internal Medicine, The University of Michigan Medical School, 1150 W Medical Center Dr., Ann Arbor, MI, 48109, USA.
Hiroko Nagao-KitamotoDivision of Gastroenterology, Department of Internal Medicine, The University of Michigan Medical School, 1150 W Medical Center Dr., Ann Arbor, MI, 48109, USA.
Peter KuffaDivision of Gastroenterology, Department of Internal Medicine, The University of Michigan Medical School, 1150 W Medical Center Dr., Ann Arbor, MI, 48109, USA.
Nobuhiko KamadaDivision of Gastroenterology, Department of Internal Medicine, The University of Michigan Medical School, 1150 W Medical Center Dr., Ann Arbor, MI, 48109, USA. nkamada@umich.edu.
University of Michigan–Ann Arbor · US

Funding

University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OWYANG, CHUNG · 1986 to 2021
$22.5M
NIDDK NIH HHS DK034933NIDDK NIH HHS P30 DK034933
6 · The paper itself

Abstract

Colonization resistance by the commensal microbiota is a key defense against infectious pathogens in the gastrointestinal tract. The microbiota directly competes with incoming pathogens by occupying the colonization niche, depleting nutrients in the gut lumen as well as indirectly inhibiting the growth of pathogens through activation of host immunity. Enteric pathogens have evolved strategies to cope with microbiota-mediated colonization resistance. Pathogens utilize a wide array of virulence factors to outcompete their commensal rivals in the gut. However, since the expression of virulence factors is costly to maintain and reduces bacterial fitness, pathogens need to regulate their virulence properly in order to maximize their fitness. To this end, most pathogens use environmental cues to regulate their virulence gene expression. Thus, a dynamic regulation of virulence factor expression is a key invasion strategy utilized by enteric pathogens. On the other hand, host immunity selectively targets virulent pathogens in order to counter infection in the gut. The host immune system is generally tolerant of harmless microorganisms, such as the commensal microbiota. Moreover, the host relies on its commensal microbiota to contribute, in concert with its immune system, to the elimination of pathogens. Collectively, regulation of virulence determines the fate of enteric pathogens, from the establishment of infection to the eventual elimination. Here, we will review the dynamics of virulence and its role in infection.

Indexed as

EnvironmentGastrointestinal MicrobiomeGastrointestinal TractGene Expression RegulationHumansImmunity, InnateMechanotransduction, CellularMicrobial InteractionsVirulenceVirulence FactorsVirulence FactorsEnteric infectionHost immunityMicrobiotaVirulence factor

Identifiers

PMID26553054
PMCPMC4767578
OpenAlexW2195995552

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.