Evidence map›Paper›PMID 26550799›Full record

ArticleDevelopmental biology2016

The mouse Foxi3 transcription factor is necessary for the development of posterior placodes.

Onur Birol, Takahiro Ohyama, Renée K Edlund, Katerina Drakou, Pantelis Georgiades, Andrew K Groves

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
1.4field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Review
  3. Thymic inborn errors of immunity.The Journal of allergy and clinical immunology · 2025
    Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Sensory cells in tunicates: insights into mechanoreceptor evolution.Frontiers in cell and developmental biology · 2024
    Review
  10. Foxi3Developmental dynamics : an official publication of the American Association of Anatomists · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Early Steps towards Hearing: Placodes and Sensory Development.International journal of molecular sciences · 2023
    Review
  15. Damaging variants in FOXI3 cause microtia and craniofacial microsomia.Genetics in medicine : official journal of the American College of Medical Genetics · 2023
    Article
  16. Inborn errors of immunity associated with defects of thymic development.Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology · 2022
    Review
  17. Article
  18. Article
  19. Comparative assessment of Fgf's diverse roles in inner ear development: A zebrafish perspective.Developmental dynamics : an official publication of the American Association of Anatomists · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Onur BirolProgram in Developmental Biology, Baylor College of Medicine, BCM295, 1 Baylor Plaza, Houston, TX 77030, USA.
Takahiro OhyamaUSC Caruso Department of Otolaryngology - Head & Neck Surgery, Keck Medicine of USC, University of Southern California, 1501 San Pablo Street, Los Angeles, CA 90033-4503, USA; Zilkha Neurogenetic Institute, Keck Medicine of USC, University of Southern California, 1501 San Pablo Street, Los Angeles, CA 90033-4503, USA.
Renée K EdlundProgram in Developmental Biology, Baylor College of Medicine, BCM295, 1 Baylor Plaza, Houston, TX 77030, USA.
Katerina DrakouDepartment of Biological Sciences, University of Cyprus, 1 University Avenue, P.O. Box 20537, 1678 Nicosia, Cyprus.
Pantelis GeorgiadesDepartment of Biological Sciences, University of Cyprus, 1 University Avenue, P.O. Box 20537, 1678 Nicosia, Cyprus.
Andrew K GrovesProgram in Developmental Biology, Baylor College of Medicine, BCM295, 1 Baylor Plaza, Houston, TX 77030, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, BCM295, 1 Baylor Plaza, Houston, TX 77030, USA; Department of Neurosc ience, Baylor College of Medicine, BCM295, 1 Baylor Plaza, Houston, TX 77030, USA. Electronic address: akgroves@bcm.edu.
Baylor College of Medicine · USUniversity of Cyprus · CYUniversity of Southern California · US

Funding

Genetic Regulation of Inner, Middle and Outer Ear DevelopmentR01DC013072 · NIDCD · WASHINGTON UNIVERSITY · PI GROVES, ANDREW K · 2013 to 2025
$5.1M
Cellular and Molecular Mechanisms of Otic Placode InductionR01DC004675 · NIDCD · HOUSE RESEARCH INSTITUTE · PI GROVES, ANDREW K · 2001 to 2011
$3.3M
Developmental Biology Training ProgramT32HD055200 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2007 to 2011
$1.3M
The function of Foxi3 in craniofacial developmentR03DC007349 · NIDCD · HOUSE RESEARCH INSTITUTE · PI OHYAMA, TAKAHIRO · 2006 to 2008
$274k
NICHD NIH HHS T32 HD055200NICHD NIH HHS T32HD055200NIDCD NIH HHS R01 DC004675NIDCD NIH HHS R01DC004675NIDCD NIH HHS R01 DC013072NIDCD NIH HHS R01DC013072NIDCD NIH HHS R03 DC007349NIDCD NIH HHS R03DC007349
6 · The paper itself

Abstract

The inner ear develops from the otic placode, one of the cranial placodes that arise from a region of ectoderm adjacent to the anterior neural plate called the pre-placodal domain. We have identified a Forkhead family transcription factor, Foxi3, that is expressed in the pre-placodal domain and down-regulated when the otic placode is induced. We now show that Foxi3 mutant mice do not form otic placodes as evidenced by expression changes in early molecular markers and the lack of thickened placodal ectoderm, an otic cup or otocyst. Some preplacodal genes downstream of Foxi3-Gata3, Six1 and Eya1-are not expressed in the ectoderm of Foxi3 mutant mice, and the ectoderm exhibits signs of increased apoptosis. We also show that Fgf signals from the hindbrain and cranial mesoderm, which are necessary for otic placode induction, are received by pre-placodal ectoderm in Foxi3 mutants, but do not initiate otic induction. Finally, we show that the epibranchial placodes that develop in close proximity to the otic placode and the mandibular division of the trigeminal ganglion are missing in Foxi3 mutants. Our data suggest that Foxi3 is necessary to prime pre-placodal ectoderm for the correct interpretation of inductive signals for the otic and epibranchial placodes.

Indexed as

AnimalsBiomarkersDown-RegulationEctodermEmbryo, MammalianEpidermisFibroblast Growth FactorsForkhead Transcription FactorsGene Expression Regulation, DevelopmentalMiceMutationNeurogenesisPAX2 Transcription FactorSignal TransductionBiomarkersFibroblast Growth FactorsForkhead Transcription FactorsFoxi3 protein, mousePax2 protein, mousePAX2 Transcription FactorCraniofacial PlacodesFGFOtic PlacodePre-placodal induction

Identifiers

PMID26550799
PMCPMC4688051
OpenAlexW2155611926

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.