Evidence map›Paper›PMID 26547207›Full record

ArticleWorld journal of pediatrics : WJP2016

Population-based frequency of surfactant dysfunction mutations in a native Chinese cohort.

Yu-Jun Chen, Jennifer Anne Wambach, Kelcey DePass, Daniel James Wegner, Shao-Ke Chen, Qun-Yuan Zhang, Hillary Heins, Francis Sessions Cole, Aaron Hamvas

Registry-linked trialAbstract read
PubMed Publisher
In one paragraph

Article in World journal of pediatrics : WJP, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00014859 (Epidemiology of Surfactant Protein-B Deficiency), which is not on this map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00014859 completednot on this map

Epidemiology of Surfactant Protein-B Deficiency

Typeobservational_patient_registrySponsorWashington University School of MedicineRan2001 to 2024Enrolled5,176ConditionsLung Diseases, Respiratory Distress Syndrome, Newborn, Pulmonary Surfactant, Lung Diseases, Interstitial
3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Chronic interstitial lung disease in children.European respiratory review : an official journal of the European Respiratory Society · 2018
    Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yu-Jun ChenDivision of Neonatology, Department of Pediatrics, the First Affiliated Hospital of Guangxi Medical University, Nanning, China.
Jennifer Anne WambachDivision of Newborn Medicine, Edward Mallinckrodt Department of Pediatrics, Washington University School of Medicine, St. Louis, USA.
Kelcey DePassDivision of Newborn Medicine, Edward Mallinckrodt Department of Pediatrics, Washington University School of Medicine, St. Louis, USA.
Daniel James WegnerDivision of Newborn Medicine, Edward Mallinckrodt Department of Pediatrics, Washington University School of Medicine, St. Louis, USA.
Shao-Ke ChenDepartment of Pediatrics, Guangxi Maternal and Child Health Hospital, Nanning, China.
Qun-Yuan ZhangDivision of Statistical Genomics, Department of Genetics, Washington University School of Medicine, St. Louis, USA.
Hillary HeinsDivision of Newborn Medicine, Edward Mallinckrodt Department of Pediatrics, Washington University School of Medicine, St. Louis, USA.
Francis Sessions ColeDivision of Newborn Medicine, Edward Mallinckrodt Department of Pediatrics, Washington University School of Medicine, St. Louis, USA.
Aaron HamvasDivision of Newborn Medicine, Edward Mallinckrodt Department of Pediatrics, Washington University School of Medicine, St. Louis, USA. ahamvas@luriechildrens.org.

Funding

EPIDEMIOLOGY OF SURFACTANT PROTEIN-B DEFICIENCYR01HL065174 · NHLBI · WASHINGTON UNIVERSITY · PI COLE, FRANCIS SESSIONS · 2001 to 2013
$9.3M
Genetic Regulation of Surfactant DeficiencyR01HL082747 · NHLBI · WASHINGTON UNIVERSITY · PI COLE, FRANCIS SESSIONS · 2007 to 2011
$3.5M
Genetic Basis of Inflammatory Airway DiseaseK12HL089968 · NHLBI · WASHINGTON UNIVERSITY · PI COLE, FRANCIS SESSIONS · 2007 to 2012
$1.6M
SURFACTANT PATHWAY GENE VARIANTS AMONG INFANTS WITH RESPIRATORY DISTRESS SYNDROMEK08HL105891 · NHLBI · WASHINGTON UNIVERSITY · PI WAMBACH, JENNIFER · 2011 to 2013
$377k
NHLBI NIH HHS K08 HL105891NHLBI NIH HHS K12 HL089968NHLBI NIH HHS R01 HL065174NHLBI NIH HHS R01 HL082747
6 · The paper itself

Abstract

backgroundRare mutations in surfactant-associated genes contribute to neonatal respiratory distress syndrome. The frequency of mutations in these genes in the Chinese population is unknown.

methodsWe obtained blood spots from the Guangxi Neonatal Screening Center in Nanning, China that included Han (n=443) and Zhuang (n=313) ethnic groups. We resequenced all exons of the surfactant proteins-B (SFTPB), -C (SFTPC), and the ATP-binding cassette member A3 (ABCA3) genes and compared the frequencies of 5 common and all rare variants.

resultsWe found minor differences in the frequencies of the common variants in the Han and Zhuang cohorts. We did not find any rare mutations in SFTPB or SFTPC, but we found three ABCA3 mutations in the Han [minor allele frequency (MAF)=0.003] and 7 in the Zhuang (MAF=0.011) cohorts (P=0.10). The ABCA3 mutations were unique to each cohort; five were novel. The collapsed carrier rate of rare ABCA3 mutations in the Han and Zhuang populations combined was 1.3%, which is significantly lower than that in the United States (P<0.001).

conclusionThe population-based frequency of mutations in ABCA3 in south China newborns is significantly lower than that in United States. The contribution of these rare ABCA3 mutations to disease burden in the south China population is still unknown.

Indexed as

MutationAsian PeopleATP-Binding Cassette TransportersFemaleHumansInfant, NewbornLung Diseases, InterstitialMalePulmonary Surfactant-Associated Protein BPulmonary Surfactant-Associated Protein CABCA3 protein, humanATP-Binding Cassette TransportersPulmonary Surfactant-Associated Protein BPulmonary Surfactant-Associated Protein Cgenetic epidemiologyhuman population geneticsneonatal respiratory distress syndromepulmonary surfactant

Identifiers

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.