Evidence map›Paper›PMID 26545093›Full record

ArticlePloS one2015

Identification of HOXD4 Mutations in Spinal Extradural Arachnoid Cyst.

Yoji Ogura, Noriko Miyake, Ikuyo Kou, Aritoshi Iida, Masahiro Nakajima, Kazuki Takeda, Shunsuke Fujibayashi, Masaaki Shiina, Eijiro Okada, Yoshiaki Toyama and 8 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. High HOXD4 protein expression in gastric adenocarcinoma tissues indicates unfavorable clinical outcomes.Saudi journal of gastroenterology : official journal of the Saudi Gastroenterology Association
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 1 country.

Yoji OguraLaboratory of Bone and Joint Diseases, RIKEN Center for Integrative Medical Sciences, Tokyo, 108-8639, Japan.
Noriko MiyakeDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.
Ikuyo KouLaboratory of Bone and Joint Diseases, RIKEN Center for Integrative Medical Sciences, Tokyo, 108-8639, Japan.
Aritoshi IidaLaboratory of Bone and Joint Diseases, RIKEN Center for Integrative Medical Sciences, Tokyo, 108-8639, Japan.
Masahiro NakajimaLaboratory of Bone and Joint Diseases, RIKEN Center for Integrative Medical Sciences, Tokyo, 108-8639, Japan.
Kazuki TakedaLaboratory of Bone and Joint Diseases, RIKEN Center for Integrative Medical Sciences, Tokyo, 108-8639, Japan.
Shunsuke FujibayashiDepartment of Orthopaedic Surgery, Kyoto University, Kyoto, 606-8507, Japan.
Masaaki ShiinaDepartment of Biochemistry, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.
Eijiro OkadaDepartment of Orthopaedic Surgery, Saiseikai Central Hospital, Tokyo, 108-0073, Japan.
Yoshiaki ToyamaDepartment of Orthopaedic Surgery, School of Medicine, Keio University, Tokyo, 160-8582, Japan.
Akio IwanamiDepartment of Orthopaedic Surgery, School of Medicine, Keio University, Tokyo, 160-8582, Japan.
Ken IshiiDepartment of Orthopaedic Surgery, School of Medicine, Keio University, Tokyo, 160-8582, Japan.
Kazuhiro OgataDepartment of Biochemistry, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.
Hiroshi AsaharaDepartment of Systems BioMedicine, Tokyo Medical and Dental University Graduate School of Medical and Dental Sciences, Tokyo, 113-8510, Japan.
Naomichi MatsumotoDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.
Masaya NakamuraDepartment of Orthopaedic Surgery, School of Medicine, Keio University, Tokyo, 160-8582, Japan.
Morio MatsumotoDepartment of Orthopaedic Surgery, School of Medicine, Keio University, Tokyo, 160-8582, Japan.
Shiro IkegawaLaboratory of Bone and Joint Diseases, RIKEN Center for Integrative Medical Sciences, Tokyo, 108-8639, Japan.
Keio University · JPRIKEN Center for Integrative Medical Sciences · JPYokohama City University · JPKyoto University · JPSaiseikai Central Hospital · JPTokyo Medical and Dental University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spinal extradural arachnoid cyst (SEDAC) is a cyst in the spinal canal that protrudes into the epidural space from a defect in the dura mater and leads to neurological disturbances. We previously showed that familial SEDAC is caused by FOXC2 mutation; however, the causal gene of sporadic SEDAC has not been identified. To identify the causal gene of sporadic SEDAC, we performed whole exome sequencing for 12 subjects with sporadic SEDAC and identified heterozygous HOXD4 loss-of-function mutations in three subjects. HOXD4 haplo-insufficiency causes SEDAC and a transcriptional network containing HOXD4 and FOXC2 is involved in the development of the dura mater and the etiology of SEDAC.

Indexed as

MutationAdultArachnoid CystsComputer SimulationDNA Mutational AnalysisExomeFemaleForkhead Transcription FactorsHaploinsufficiencyHeterozygoteHomeodomain ProteinsHumansMaleMiddle AgedSpinal Cord DiseasesForkhead Transcription FactorsHomeodomain Proteinsmesenchyme fork head 1 protein

Identifiers

PMID26545093
PMCPMC4636324
OpenAlexW2123028189

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.