Evidence map›Paper›PMID 26544909›Full record

ArticleAnalytical chemistry2015

Method for Sorting and Pairwise Selection of Nanobodies for the Development of Highly Sensitive Sandwich Immunoassays.

Martín A Rossotti, Macarena Pirez, Andres Gonzalez-Techera, Yongliang Cui, Candace S Bever, Kin S S Lee, Christophe Morisseau, Carmen Leizagoyen, Shirley Gee, Bruce D Hammock and 1 more

Open access · greenAbstract read
In one paragraph

Article in Analytical chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
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  4. Biophysical and biochemical insights in the design of immunoassays.Biochimica et biophysica acta. General subjects · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Martín A RossottiCátedra de Inmunología, DEPBIO, Facultad de Química, Instituto de Higiene, UDELAR , Montevideo, Uruguay.
Macarena PirezCátedra de Inmunología, DEPBIO, Facultad de Química, Instituto de Higiene, UDELAR , Montevideo, Uruguay.
Andres Gonzalez-TecheraCátedra de Inmunología, DEPBIO, Facultad de Química, Instituto de Higiene, UDELAR , Montevideo, Uruguay.
Yongliang CuiDepartment of Entomology and Nematology and UC Davis Comprehensive Cancer Center, University of California , Davis, California, United States.
Candace S BeverDepartment of Entomology and Nematology and UC Davis Comprehensive Cancer Center, University of California , Davis, California, United States.
Kin S S LeeDepartment of Entomology and Nematology and UC Davis Comprehensive Cancer Center, University of California , Davis, California, United States.
Christophe MorisseauDepartment of Entomology and Nematology and UC Davis Comprehensive Cancer Center, University of California , Davis, California, United States.
Carmen LeizagoyenParque Lecocq, IMM, Montevideo, Uruguay.
Shirley GeeDepartment of Entomology and Nematology and UC Davis Comprehensive Cancer Center, University of California , Davis, California, United States.
Bruce D HammockDepartment of Entomology and Nematology and UC Davis Comprehensive Cancer Center, University of California , Davis, California, United States.
Gualberto González-SapienzaCátedra de Inmunología, DEPBIO, Facultad de Química, Instituto de Higiene, UDELAR , Montevideo, Uruguay.
University of California, Davis · USUC Davis Comprehensive Cancer Center

Funding

Workshop on Environmental Technology Transfer and EntrepreneurshipP42ES004699 · NIEHS · UNIVERSITY OF CALIFORNIA DAVIS · PI HAMMOCK, BRUCE D · 1987 to 2021
$50.1M
UC Davis Environmental Health Sciences Core CenterP30ES023513 · NIEHS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Ameer Taha · 2015 to 2026
$26.0M
International Training Program in Environmental Toxicology and Public HealthD43TW005718 · FIC · UNIVERSITY OF CALIFORNIA DAVIS · PI LAST, JEROLD ALAN · 2001 to 2011
$1.7M
Identifying the Receptors of Environmentally Sensitive Epoxy-Eicosanoids with AMSK99ES024806 · NIEHS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LEE, KIN SING STEPHEN · 2015 to 2016
$132k
FIC NIH HHS D43 TW005718FIC NIH HHS TW05718NIEHS NIH HHS 1K99ES024806-01NIEHS NIH HHS K99 ES024806NIEHS NIH HHS P30 ES023513NIEHS NIH HHS P42 ES004699NIEHS NIH HHS P42 ES04699
6 · The paper itself

Abstract

Single domain heavychain binders (nanobodies) obtained from camelid antibody libraries hold a great promise for immunoassay development. However, there is no simple method to select the most valuable nanobodies from the crowd of positive clones obtained after the initial screening. In this paper, we describe a novel nanobody-based platform that allows comparison of the reactivity of hundreds of clones with the labeled antigen, and identifies the best nanobody pairs for two-site immunoassay development. The output clones are biotinylated in vivo in 96-well culture blocks and then used to saturate the biotin binding capacity of avidin coated wells. This standardizes the amount of captured antibody allowing their sorting by ranking their reactivity with the labeled antigen. Using human soluble epoxide hydrolase (sEH) as a model antigen, we were able to classify 96 clones in four families and confirm this classification by sequencing. This provided a criterion to select a restricted panel of five capturing antibodies and to test each of them against the rest of the 96 clones. The method constitutes a powerful tool for epitope binning, and in our case allowed development of a sandwich ELISA for sEH with a detection limit of 63 pg/mL and four log dynamic range, which performed with excellent recovery in different tissue extracts. This strategy provides a systematic way to test nanobody pairwise combinations and would have a broad utility for the development of highly sensitive sandwich immunoassays.

Indexed as

Enzyme-Linked Immunosorbent AssayAntigen-Antibody ReactionsAntigensEpoxide HydrolasesHumansRecombinant ProteinsSingle-Domain AntibodiesSolubilityAntigensEpoxide HydrolasesRecombinant ProteinsSingle-Domain Antibodies

Identifiers

PMID26544909
PMCPMC4666776
OpenAlexW2341023300

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.