Evidence map›Paper›PMID 26544067›Full record

ArticlePLoS genetics2015

UFBP1, a Key Component of the Ufm1 Conjugation System, Is Essential for Ufmylation-Mediated Regulation of Erythroid Development.

Yafei Cai, Wenhu Pi, Satish Sivaprakasam, Xiaobin Zhu, Mingsheng Zhang, Jijun Chen, Levi Makala, Chunwan Lu, Jianchu Wu, Yong Teng and 4 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed, 1 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 1 synthesis or guideline pooled it, 181 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Ufl1-Mediated UFMylation Sustains Amelogenesis by Stabilizing RUNX2.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  4. Article
  5. The mechanistic basis and cellular functions of UFMylation.Nature reviews. Molecular cell biology · 2026
    Review
  6. Article
  7. Article
  8. UFMylation of Pyruvate Dehydrogenase Regulates Mitochondrial Metabolism.bioRxiv : the preprint server for biology · 2026
    Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. DDRGK1 preserves intervertebral disc development through ufmylation.Cellular and molecular life sciences : CMLS · 2025
    Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Akt-phosphorylated UFL1 UFMylates ArpC4 to promote metastasis.Nature structural & molecular biology · 2025
    Article
  20. Article

45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Yafei CaiDepartment of Bioscience, College of Life Sciences, Anhui Normal University, Wuhu, Anhui, China.
Wenhu PiDepartment of Biochemistry & Molecular Biology, Georgia Regents University, Augusta, Georgia, United States of America.
Satish SivaprakasamDepartment of Biochemistry & Molecular Biology, Georgia Regents University, Augusta, Georgia, United States of America.
Xiaobin ZhuDepartment of Orthopedic Surgery, Zhongnan Hospital of Wuhan University, Wuhan, China.
Mingsheng ZhangDepartment of Oncology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Jijun ChenDepartment of Biochemistry & Molecular Biology, Georgia Regents University, Augusta, Georgia, United States of America.
Levi MakalaDepartment of Pediatrics, Georgia Regents University, Augusta, Georgia, United States of America.
Chunwan LuDepartment of Biochemistry & Molecular Biology, Georgia Regents University, Augusta, Georgia, United States of America.
Jianchu WuDepartment of Periodontics, College of Dentistry, Cancer Center, University of Illinois at Chicago, Chicago, Illinois, United States of America.
Yong TengCancer Center, Georgia Regents University, Augusta, Georgia, United States of America.
Betty PaceDepartment of Biochemistry & Molecular Biology, Georgia Regents University, Augusta, Georgia, United States of America.
Dorothy TuanDepartment of Biochemistry & Molecular Biology, Georgia Regents University, Augusta, Georgia, United States of America.
Nagendra SinghDepartment of Biochemistry & Molecular Biology, Georgia Regents University, Augusta, Georgia, United States of America.
Honglin LiDepartment of Biochemistry & Molecular Biology, Georgia Regents University, Augusta, Georgia, United States of America.
Augusta University · USGeorgia Regents Medical Center · USTongji Hospital · CNUniversity of Illinois Chicago · USZhongnan Hospital of Wuhan University · CN

Funding

Functional study of C53 protein as a novel regulator of checkpoint kinasesR01GM081776 · NIGMS · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI LI, HONGLIN · 2008 to 2012
$1.5M
Regulation of colonic inflammation by butyrate/niacin receptor Gpr109aR01DK103576 · NIDDK · AUGUSTA UNIVERSITY · PI SINGH, NAGENDRA · 2014 to 2017
$1.3M
NIDDK NIH HHS R01 DK103576NIGMS NIH HHS R01 GM081776
6 · The paper itself

Abstract

The Ufm1 conjugation system is an ubiquitin-like modification system that consists of Ufm1, Uba5 (E1), Ufc1 (E2), and less defined E3 ligase(s) and targets. The biological importance of this system is highlighted by its essential role in embryogenesis and erythroid development, but the underlying mechanism is poorly understood. UFBP1 (Ufm1 binding protein 1, also known as DDRGK1, Dashurin and C20orf116) is a putative Ufm1 target, yet its exact physiological function and impact of its ufmylation remain largely undefined. In this study, we report that UFBP1 is indispensable for embryonic development and hematopoiesis. While germ-line deletion of UFBP1 caused defective erythroid development and embryonic lethality, somatic ablation of UFBP1 impaired adult hematopoiesis, resulting in pancytopenia and animal death. At the cellular level, UFBP1 deficiency led to elevated ER (endoplasmic reticulum) stress and activation of unfolded protein response (UPR), and consequently cell death of hematopoietic stem/progenitor cells. In addition, loss of UFBP1 suppressed expression of erythroid transcription factors GATA-1 and KLF1 and blocked erythroid differentiation from CFU-Es (colony forming unit-erythroid) to proerythroblasts. Interestingly, depletion of Uba5, a Ufm1 E1 enzyme, also caused elevation of ER stress and under-expression of erythroid transcription factors in erythroleukemia K562 cells. By contrast, knockdown of ASC1, a newly identified Ufm1 target that functions as a transcriptional co-activator of hormone receptors, led to down-regulation of erythroid transcription factors, but did not elevate basal ER stress. Furthermore, we found that ASC1 was associated with the promoters of GATA-1 and Klf1 in a UFBP1-dependent manner. Taken together, our findings suggest that UFBP1, along with ASC1 and other ufmylation components, play pleiotropic roles in regulation of hematopoietic cell survival and differentiation via modulating ER homeostasis and erythroid lineage-specific gene expression. Modulating the activity of this novel ubiquitin-like system may represent a novel approach to treat blood-related diseases such as anemia.

Indexed as

ErythropoiesisAnimalsCarrier ProteinsEmbryonic DevelopmentMiceMice, KnockoutCarrier ProteinsUFM1-binding protein 1 containing a PCI domain, mouse

Identifiers

PMID26544067
PMCPMC4636156
OpenAlexW2182395638

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.