Evidence map›Paper›PMID 26543127›Full record

ArticleGenome announcements2015

Genome Sequence of Porphyromonas gingivalis Strain AJW4.

Gary Xie, Ryan P Chastain-Gross, Myriam Bélanger, Dibyendu Kumar, Joan A Whitlock, Li Liu, William G Farmerie, Hajnalka E Daligault, Cliff S Han, Thomas S Brettin and 1 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genome announcements, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Genome Sequence ofGenome announcements · 2017
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Gary XieBioenergy and Biome Sciences (B-11), Bioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Ryan P Chastain-GrossDepartment of Oral Biology, University of Florida, Gainesville, Florida, USA Center for Molecular Microbiology, University of Florida, Gainesville, Florida, USA gross.ryanp@ufl.edu apfox@dental.ufl.edu.
Myriam BélangerDepartment of Oral Biology, University of Florida, Gainesville, Florida, USA Center for Molecular Microbiology, University of Florida, Gainesville, Florida, USA.
Dibyendu KumarInterdisciplinary Center for Biotechnology Research, University of Florida, Gainesville, Florida, USA.
Joan A WhitlockDepartment of Oral Biology, University of Florida, Gainesville, Florida, USA Center for Molecular Microbiology, University of Florida, Gainesville, Florida, USA.
Li LiuInterdisciplinary Center for Biotechnology Research, University of Florida, Gainesville, Florida, USA.
William G FarmerieInterdisciplinary Center for Biotechnology Research, University of Florida, Gainesville, Florida, USA.
Hajnalka E DaligaultBioenergy and Biome Sciences (B-11), Bioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Cliff S HanBioenergy and Biome Sciences (B-11), Bioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Thomas S BrettinBioenergy and Biome Sciences (B-11), Bioscience Division, Los Alamos National Laboratory, Los Alamos, New Mexico, USA.
Ann Progulske-FoxDepartment of Oral Biology, University of Florida, Gainesville, Florida, USA Center for Molecular Microbiology, University of Florida, Gainesville, Florida, USA gross.ryanp@ufl.edu apfox@dental.ufl.edu.

Funding

INTERACTIONS BETWEEN ORAL PATHOGENS AND VASCULAR CELLSR01DE013545 · NIDCR · UNIVERSITY OF FLORIDA · PI PROGULSKE-FOX, ANN · 2000 to 2010
$4.3M
NIDCR NIH HHS R01 DE013545NIDCR NIH HHS Y01 DE006006
6 · The paper itself

Abstract

Porphyromonas gingivalis is associated with oral and systemic diseases. Strain-specific P. gingivalis invasion phenotypes have been correlated with disease presentation in infected laboratory animals. Here, we present the genome sequence of AJW4, a minimally invasive strain, with a single contig of 2,372,492 bp and a G+C content of 48.27%.

Identifiers

PMID26543127
PMCPMC4645212

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.