Evidence map›Paper›PMID 26542354›Full record

ArticleVirology journal2015

Zahedan rhabdovirus, a novel virus detected in ticks from Iran.

Meik Dilcher, Oumar Faye, Ousmane Faye, Franziska Weber, Andrea Koch, Chinikar Sadegh, Manfred Weidmann, Amadou Alpha Sall

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Tick-Borne Viruses.Virologica Sinica · 2018
    Review
  8. Tick-Borne Viruses and Biological Processes at the Tick-Host-Virus Interface.Frontiers in cellular and infection microbiology · 2017
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Meik DilcherDepartment of Virology, Univerity Medical Center Göttingen, Kreuzbergring 57, 37075, Göttingen, Germany. meik.dilcher@medizin.uni-goettingen.de.
Oumar FayeInstitute Pasteur de Dakar, 36 Avenue Pasteur, BP 220, Dakar, Senegal. oumarfaye@pasteur.sn.
Ousmane FayeInstitute Pasteur de Dakar, 36 Avenue Pasteur, BP 220, Dakar, Senegal. ousmanefaye@pasteur.sn.
Franziska WeberDepartment of Virology, Univerity Medical Center Göttingen, Kreuzbergring 57, 37075, Göttingen, Germany. afranziskaweber@web.de.
Andrea KochDepartment of Virology, Univerity Medical Center Göttingen, Kreuzbergring 57, 37075, Göttingen, Germany. akoch1@gwdg.de.
Chinikar SadeghPasteur Institute of Iran, 69 Pasteur Avenue, Tehran, Iran. sadeghchinikar@yahoo.com.
Manfred WeidmannInstitute of Aquaculture, University of Stirling, Stirling, FK9 4LA, UK. m.w.weidmann@stir.ac.uk.
Amadou Alpha SallInstitute Pasteur de Dakar, 36 Avenue Pasteur, BP 220, Dakar, Senegal. asall@pasteur.sn.
Institut Pasteur de Dakar · SNUniversity of Göttingen · DEPasteur Institute of Iran · IRUniversity of Stirling · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRhabdoviridae infect a wide range of vertebrates, invertebrates and plants. Their transmission can occur via various arthropod vectors. In recent years, a number of novel rhabdoviruses have been identified from various animal species, but so far only few tick-transmitted rhabdoviruses have been described.

methodsWe isolated a novel rhabdovirus, provisionally named Zahedan rhabdovirus (ZARV), from Hyalomma anatolicum anatolicum ticks collected in Iran. The full-length genome was determined using 454 next-generation sequencing and the phylogenetic relationship to other rhabdoviruses was analyzed. Inoculation experiments in mammalian Vero cells and mice were conducted and a specific PCR assay was developed.

resultsThe complete genome of ZARV has a size of 11,230 nucleotides (nt) with the typical genomic organization of Rhabdoviridae. Phylogenetic analysis confirms that ZARV is closely related to Moussa virus (MOUV) from West Africa and Long Island tick rhabdovirus (LITRV) from the U.S., all forming a new monophyletic clade, provisionally designated Zamolirhabdovirus, within the Dimarhabdovirus supergroup. The glycoprotein (G) contains 12 conserved cysteins which are specific for animal rhabdoviruses infecting fish and mammals. In addition, ZARV is able to infect mammalian Vero cells and is lethal for mice when inoculated intracerebrally or subcutaneously. The developed PCR assay can be used to specifically detect ZARV.

conclusionThe novel tick-transmitted rhabdovirus ZARV is closely related to MOUV and LITRV. All three viruses seem to form a new monophyletic clade. ZARV might be pathogenic for mammals, since it can infect Vero cells, is lethal for mice and its glycoprotein contains 12 conserved cysteins only found in animal rhabdoviruses. The mammalian host of ZARV remains to be identified.

Indexed as

AnimalsChlorocebus aethiopsCluster AnalysisDisease Models, AnimalGene OrderGenome, ViralIranIxodidaeMice, Inbred BALB CMolecular Sequence DataPhylogenyRhabdoviridaeRhabdoviridae InfectionsRNA, ViralSequence Analysis, DNASequence HomologyRNA, Viral

Identifiers

PMID26542354
PMCPMC4635997
OpenAlexW2108087470

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.