Evidence map›Paper›PMID 26541974›Full record

ArticleACS chemical biology2016

Enhanced Cross-Linking of Diazirine-Modified Sialylated Glycoproteins Enabled through Profiling of Sialidase Specificities.

Janet E McCombs, Chunxia Zou, Randy B Parker, Christopher W Cairo, Jennifer J Kohler

Abstract read
In one paragraph

Article in ACS chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Metabolic control of glycosylation forms for establishing glycan-dependent protein interaction networks.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Chemical Glycoproteomics.Chemical reviews · 2016
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Janet E McCombsDepartment of Biochemistry, The University of Texas Southwestern Medical Center , Dallas, Texas 75390-9038, United States.
Chunxia ZouAlberta Glycomics Centre, Department of Chemistry, University of Alberta , Edmonton, Alberta T6G 2G2, Canada.
Randy B ParkerDepartment of Biochemistry, The University of Texas Southwestern Medical Center , Dallas, Texas 75390-9038, United States.
Christopher W CairoAlberta Glycomics Centre, Department of Chemistry, University of Alberta , Edmonton, Alberta T6G 2G2, Canada.
Jennifer J KohlerDepartment of Biochemistry, The University of Texas Southwestern Medical Center , Dallas, Texas 75390-9038, United States.
The University of Texas Southwestern Medical Center · USUniversity of Alberta · CA

Funding

MECHANISMS OF DRUG ACTION AND DISPOSITIONT32GM007062 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI MANGELSDORF, DAVID J · 1985 to 2020
$7.4M
Study of sialoside function using photocrosslinking sialic acidR01GM090271 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI KOHLER, JENNIFER J · 2009 to 2021
$4.4M
NIGMS NIH HHS R01 GM090271NIGMS NIH HHS R01GM090271NIGMS NIH HHS T32 GM007062NIGMS NIH HHS T32GM007062
6 · The paper itself

Abstract

Sialic-acid-mediated interactions play critical roles on the cell surface, providing an impetus for the development of methods to study this important monosaccharide. In particular, photo-cross-linking sialic acids incorporated onto cell surfaces have allowed covalent capture of transient interactions between sialic acids and sialic-acid-recognizing proteins via cross-linking. However, natural sialic acids also present on the cell surface compete with photo-cross-linking sialic acids in binding events, limiting cross-linking yields. In order to improve the utility of one such photo-cross-linking sialic acid, SiaDAz, we examined a number of sialidases, enzymes that remove sialic acids from glycoconjugates, to find one that would cleave natural sialic acids but remain inactive toward SiaDAz. Using this sialidase, we improved SiaDAz-mediated cross-linking of an antisialyl Lewis X antibody and of endoglin. This protocol can be applied generally to sialic-acid-mediated interactions and will facilitate identification of sialic acid binding partners.

Indexed as

AntibodiesAntigens, CDBacteriaCells, CulturedCross-Linking ReagentsDiazomethaneEndoglinGlycoproteinsHumansNeuraminidaseReceptors, Cell SurfaceSialic AcidsSubstrate SpecificityAntibodiesAntigens, CDCross-Linking ReagentsDiazomethaneEndoglinENG protein, humanGlycoproteinsNeuraminidaseReceptors, Cell SurfaceSialic Acids

Identifiers

PMID26541974
PMCPMC4731091
OpenAlexW2265149938

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.