Evidence map›Paper›PMID 26541824›Full record

ArticleBMC plant biology2015

NtGNL1a ARF-GEF acts in endocytosis in tobacco cells.

Adriana Jelínková, Karel Müller, Markéta Fílová-Pařezová, Jan Petrášek

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. No Time for Transcription-Rapid Auxin Responses in Plants.Cold Spring Harbor perspectives in biology · 2021
    Review
  3. Identification and Analysis ofFrontiers in plant science · 2021
    Article
  4. Article
  5. TheFrontiers in plant science · 2017
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Adriana JelínkováInstitute of Experimental Botany, Academy of Sciences of the Czech Republic, Rozvojová 263, 165 02, Prague 6, Czech Republic. jelinkovaa@ueb.cas.cz.
Karel MüllerInstitute of Experimental Botany, Academy of Sciences of the Czech Republic, Rozvojová 263, 165 02, Prague 6, Czech Republic. muller@ueb.cas.cz.
Markéta Fílová-PařezováInstitute of Experimental Botany, Academy of Sciences of the Czech Republic, Rozvojová 263, 165 02, Prague 6, Czech Republic. filova@ueb.cas.cz.
Jan PetrášekInstitute of Experimental Botany, Academy of Sciences of the Czech Republic, Rozvojová 263, 165 02, Prague 6, Czech Republic. petrasek@ueb.cas.cz.
Czech Academy of Sciences · CZCharles University · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundProcesses of anterograde and retrograde membrane trafficking play an important role in cellular homeostasis and dynamic rearrangements of the plasma membrane (PM) in all eukaryotes. These processes depend on the activity of adenosine ribosylation factors (ARFs), a family of GTP-binding proteins and their guanine exchange factors (GEFs). However, knowledge on the function and specificity of individual ARF-GEFs for individual steps of membrane trafficking pathways is still limited in plants.

resultsIn this work, treatments with various trafficking inhibitors showed that the endocytosis of FM 4-64 is largely dynamin-dependent and relies on proteins containing endocytic tyrosine-based internalization motif and intact cytoskeleton. Interestingly, brefeldin A (BFA), reported previously as an inhibitor of anterograde membrane trafficking in plants, appeared to be the most potent inhibitor of endocytosis in tobacco. In concert with this finding, we demonstrate that the point mutation in the Sec7 domain of the GNOM-LIKE protein1a (NtGNL1a) confers intracellular trafficking pathway-specific BFA resistance. The internalization of FM 4-64 and trafficking of PIN-FORMED1 (PIN1) auxin efflux carrier in BY-2 tobacco cells were studied to reveal the function of the ARF-GEF NtGNL1a in these.

conclusionsAltogether, our observations uncovered the role of NtGNL1a in endocytosis, including endocytosis of PM proteins (as PIN1 auxin efflux carrier). Moreover these data emphasize the need of careful evaluation of mode of action of non-native inhibitors in various species. In addition, they demonstrate the potential of tobacco BY-2 cells for selective mapping of ARF-GEF-regulated endomembrane trafficking pathways.

Indexed as

EndocytosisGuanine Nucleotide Exchange FactorsNicotianaPlant CellsPlant ProteinsProtein TransportPyridinium CompoundsQuaternary Ammonium CompoundsFM 4-64Guanine Nucleotide Exchange FactorsPlant ProteinsPyridinium CompoundsQuaternary Ammonium Compounds

Identifiers

PMID26541824
PMCPMC4635988
OpenAlexW2118575512

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.