Evidence map›Paper›PMID 26541461›Full record

ReviewTrends in biochemical sciences2015

Redefining the BH3 Death Domain as a 'Short Linear Motif'.

Abdel Aouacheria, Christophe Combet, Peter Tompa, J Marie Hardwick

Abstract readReview
In one paragraph

Review in Trends in biochemical sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Review
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  5. A billion years of evolution manifest in nanosecond protein dynamics.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Abdel AouacheriaMolecular Biology of the Cell Laboratory, Ecole Normale Supérieure de Lyon, UMR 5239, CNRS-UCBL-ENS Lyon, 46 Allée d'Italie, 69364 Lyon cedex 07, France. Electronic address: abdel.aouacheria@ens-lyon.fr.
Christophe CombetBases Moléculaires et Structurales des Systèmes Infectieux, UMR 5086, CNRS, Université Lyon 1, IBCP - 7 passage du Vercors, 69367 Lyon cedex 07, France; Centre de Recherche en Cancérologie de Lyon, UMR INSERM U1052, CNRS 5286, Centre Léon Bérard, Université Lyon 1, 151 cours Albert Thomas, 69424 Lyon cedex 03, France.
Peter TompaInstitute of Enzymology, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Budapest 1117, Hungary; VIB Structural Biology Research Center (SBRC), Vrije Universiteit Brussel, Brussels 1050, Belgium.
J Marie HardwickW. Harry Feinstone Department of Molecular Microbiology and Immunology, Johns Hopkins University Bloomberg School of Public Health, Baltimore, MD 21205, USA. Electronic address: hardwick@jhu.edu.

Funding

REGULATION OF BCL XL BY CASPASESR01NS037402 · NINDS · JOHNS HOPKINS UNIVERSITY · PI HARDWICK, J. MARIE · 1999 to 2014
$4.5M
MICRORNA AND NEURAL FACTOR-MEDIATED DIRECT REPROGRAMMING OF CELL FATESDP2NS083372 · NINDS · WASHINGTON UNIVERSITY · PI YOO, ANDREW · 2012 to 2017
$2.7M
Conserved Cell Death Pathways in Mammals and YeastR01GM077875 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI HARDWICK, J. MARIE · 2006 to 2010
$1.4M
NIGMS NIH HHS R01 GM077875NINDS NIH HHS DP2 NS083372NINDS NIH HHS R01 NS037402NINDS NIH HHS R01 NS083372
6 · The paper itself

Abstract

B cell lymphoma-2 (BCL-2)-related proteins control programmed cell death through a complex network of protein-protein interactions mediated by BCL-2 homology 3 (BH3) domains. Given their roles as dynamic linchpins, the discovery of novel BH3-containing proteins has attracted considerable attention. However, without a clearly defined BH3 signature sequence the BCL-2 family has expanded to include a nebulous group of nonhomologous BH3-only proteins, now justified by an intriguing twist. We present evidence that BH3s from both ordered and disordered proteins represent a new class of short linear motifs (SLiMs) or molecular recognition features (MoRFs) and are diverse in their evolutionary histories. The implied corollaries are that BH3s have a broad phylogenetic distribution and could potentially bind to non-BCL-2-like structural domains with distinct functions.

Indexed as

Amino Acid MotifsAnimalsBH3 Interacting Domain Death Agonist ProteinHumansModels, MolecularProtein ConformationBH3 Interacting Domain Death Agonist ProteinBCL-2 familyBH3globular domainsintrinsically disordered proteinsMoRF/MoRESLiM

Identifiers

PMID26541461
PMCPMC5056427

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.