Evidence map›Paper›PMID 26540169›Full record

ArticlePLoS genetics2015

Mosaic and Intronic Mutations in TSC1/TSC2 Explain the Majority of TSC Patients with No Mutation Identified by Conventional Testing.

Magdalena E Tyburczy, Kira A Dies, Jennifer Glass, Susana Camposano, Yvonne Chekaluk, Aaron R Thorner, Ling Lin, Darcy Krueger, David N Franz, Elizabeth A Thiele and 2 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 154 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
154citing papers in PubMed, 4 pooled it
12.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

154 citing papers in PubMed, 4 syntheses or guidelines pooled it, 294 citations in OpenAlex.

  1. Rapamycin and rapalogs for tuberous sclerosis complex.The Cochrane database of systematic reviews · 2023
    Pooled it
  2. Pooled it
  3. Pooled it
  4. Rapamycin and rapalogs for tuberous sclerosis complex.The Cochrane database of systematic reviews · 2016
    Pooled it
  5. Article
  6. Article
  7. Prenatal diagnosis of cardiac rhabdomyoma: implications for predicting tuberous sclerosis complex and guiding perinatal management.Ultrasound in obstetrics & gynecology : the official journal of the International Society of Ultrasound in Obstetrics and Gynecology · 2026
    Article
  8. Observational
  9. Article
  10. Tuberous sclerosis complex with multisystem involvement: A case report.The Journal of international medical research · 2026
    Article
  11. Article
  12. Molecular Characterization ofHuman mutation · 2026
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Case - Genetic mosaicism of TSC2 gene in a patient with multifocal renal epithelioid angiomyolipomas.Canadian Urological Association journal = Journal de l'Association des urologues du Canada · 2025
    Article
  19. Article
  20. Insights into Tuberous Sclerosis Complex : From Genes to Clinics.Journal of Korean Neurosurgical Society · 2025
    Article

94 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Magdalena E TyburczyDepartment of Medicine, Brigham and Women's Hospital, Boston, Massachusetts, United States of America.
Kira A DiesDepartment of Neurology, Boston Children's Hospital, Boston, Massachusetts, United States of America.
Jennifer GlassDepartment of Human Genetics, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.
Susana CamposanoDepartment of Neurology, Massachusetts General Hospital, Boston, Massachusetts, United States of America.
Yvonne ChekalukDepartment of Medicine, Brigham and Women's Hospital, Boston, Massachusetts, United States of America.
Aaron R ThornerCenter for Cancer Genome Discovery, Dana Farber Cancer Institute, Boston, Massachusetts, United States of America.
Ling LinCenter for Cancer Genome Discovery, Dana Farber Cancer Institute, Boston, Massachusetts, United States of America.
Darcy KruegerDepartment of Pediatrics, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.
David N FranzDepartment of Pediatrics, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, United States of America.
Elizabeth A ThieleDepartment of Neurology, Massachusetts General Hospital, Boston, Massachusetts, United States of America.
Mustafa SahinDepartment of Neurology, Boston Children's Hospital, Boston, Massachusetts, United States of America.
David J KwiatkowskiDepartment of Medicine, Brigham and Women's Hospital, Boston, Massachusetts, United States of America.
Brigham and Women's Hospital · USBoston Children's Hospital · USCincinnati Children's Hospital Medical Center · USDana-Farber Cancer Institute · USMassachusetts General Hospital · US

Funding

HARVARD CLINICAL AND TRANSLATIONAL SCIENCE CENTER (UL1)UL1RR025758 · NCRR · HARVARD MEDICAL SCHOOL · PI NADLER, LEE MARSHALL · 2008 to 2011
$91.4M
Tuberous Sclerosis-Pathway and PathogenesisP01CA120964 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI David J. Kwiatkowski · 2007 to 2026
$35.9M
Toward better characterization and clinical trial readiness for targeting neuropsychiatric manifestations in PTEN pathogenic variantsU54NS092090 · NINDS · BOSTON CHILDREN'S HOSPITAL · PI M. Pilar Trelles · 2014 to 2026
$20.1M
NCI NIH HHS 1P01CA120964NCI NIH HHS P01 CA120964NCRR NIH HHS UL1 RR025758NINDS NIH HHS U54 NS092090
6 · The paper itself

Abstract

Tuberous sclerosis complex (TSC) is an autosomal dominant tumor suppressor gene syndrome due to germline mutations in either TSC1 or TSC2. 10-15% of TSC individuals have no mutation identified (NMI) after thorough conventional molecular diagnostic assessment. 53 TSC subjects who were NMI were studied using next generation sequencing to search for mutations in these genes. Blood/saliva DNA including parental samples were available from all subjects, and skin tumor biopsy DNA was available from six subjects. We identified mutations in 45 of 53 subjects (85%). Mosaicism was observed in the majority (26 of 45, 58%), and intronic mutations were also unusually common, seen in 18 of 45 subjects (40%). Seventeen (38%) mutations were seen at an allele frequency < 5%, five at an allele frequency < 1%, and two were identified in skin tumor biopsies only, and were not seen at appreciable frequency in blood or saliva DNA. These findings illuminate the extent of mosaicism in TSC, indicate the importance of full gene coverage and next generation sequencing for mutation detection, show that analysis of TSC-related tumors can increase the mutation detection rate, indicate that it is not likely that a third TSC gene exists, and enable provision of genetic counseling to the substantial population of TSC individuals who are currently NMI.

Indexed as

IntronsMosaicismMutationHumansTuberous Sclerosis Complex 1 ProteinTuberous Sclerosis Complex 2 ProteinTumor Suppressor ProteinsTSC1 protein, humanTSC2 protein, humanTuberous Sclerosis Complex 1 ProteinTuberous Sclerosis Complex 2 ProteinTumor Suppressor Proteins

Identifiers

PMID26540169
PMCPMC4634999
OpenAlexW2103758608

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.