Evidence map›Paper›PMID 26540018›Full record

ArticleMicrobiologyOpen2015

Two novel regulators of N-acetyl-galactosamine utilization pathway and distinct roles in bacterial infections.

Huimin Zhang, Dmitry A Ravcheev, Dan Hu, Fengyu Zhang, Xiufang Gong, Lina Hao, Min Cao, Dmitry A Rodionov, Changjun Wang, Youjun Feng

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

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  10. Functional definition of NrtR, a remnant regulator of NADFASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
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  17. N-acetylgalatosamine-Mediated Regulation of theFrontiers in cellular and infection microbiology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Huimin ZhangDepartment of Medical Microbiology and Parasitology, Zhejiang University School of Medicine, Hangzhou, Zhejiang, 310058, China.
Dmitry A RavcheevLuxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-sur-Alzette, L-4360, Luxembourg.
Dan HuDepartment of Epidemiology, Research Institute for Medicine of Nanjing Command, Nanjing, 210002, China.
Fengyu ZhangDepartment of Epidemiology, Research Institute for Medicine of Nanjing Command, Nanjing, 210002, China.
Xiufang GongDepartment of Epidemiology, Research Institute for Medicine of Nanjing Command, Nanjing, 210002, China.
Lina HaoDepartment of Epidemiology, Research Institute for Medicine of Nanjing Command, Nanjing, 210002, China.
Min CaoDepartment of Epidemiology, Research Institute for Medicine of Nanjing Command, Nanjing, 210002, China.
Dmitry A RodionovA.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, 127994, Russia.
Changjun WangDepartment of Epidemiology, Research Institute for Medicine of Nanjing Command, Nanjing, 210002, China.
Youjun FengDepartment of Medical Microbiology and Parasitology, Zhejiang University School of Medicine, Hangzhou, Zhejiang, 310058, China.
Nanjing General Hospital of Nanjing Military Command · CNZhejiang University · CNInstitute for Information Transmission Problems · RUUniversity of Luxembourg · LU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial pathogens can exploit metabolic pathways to facilitate their successful infection cycles, but little is known about roles of d-galactosamine (GalN)/N-acetyl-d-galactosamine (GalNAc) catabolism pathway in bacterial pathogenesis. Here, we report the genomic reconstruction of GalN/GalNAc utilization pathway in Streptococci and the diversified aga regulons. We delineated two new paralogous AgaR regulators for the GalN/GalNAc catabolism pathway. The electrophoretic mobility shift assays experiment demonstrated that AgaR2 (AgaR1) binds the predicted palindromes, and the combined in vivo data from reverse transcription quantitative polymerase chain reaction and RNA-seq suggested that AgaR2 (not AgaR1) can effectively repress the transcription of the target genes. Removal of agaR2 (not agaR1) from Streptococcus suis 05ZYH33 augments significantly the abilities of both adherence to Hep-2 cells and anti-phagocytosis against RAW264.7 macrophage. As anticipated, the dysfunction in AgaR2-mediated regulation of S. suis impairs its pathogenicity in experimental models of both mice and piglets. Our finding discovered two novel regulators specific for GalN/GalNAc catabolism and assigned them distinct roles into bacterial infections. To the best of our knowledge, it might represent a first paradigm that links the GalN/GalNAc catabolism pathway to bacterial pathogenesis.

Indexed as

AcetylgalactosamineAnimalsBacterial ProteinsHumansMiceRAW 264.7 CellsRegulonStreptococcal InfectionsStreptococcus suisTranscription FactorsVirulenceAcetylgalactosamineBacterial ProteinsTranscription FactorsAgaRamino sugarsd-galactosamineN-acetyl-d-galactosamineStreptococcus suisvirulence.

Identifiers

PMID26540018
PMCPMC4694137
OpenAlexW2165863298

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.