Evidence map›Paper›PMID 26539199›Full record

ArticleFrontiers in plant science2015

Transcriptome analysis of wheat inoculated with Fusarium graminearum.

Mustafa Erayman, Mine Turktas, Guray Akdogan, Tugba Gurkok, Behcet Inal, Emre Ishakoglu, Emre Ilhan, Turgay Unver

Abstract read
In one paragraph

Article in Frontiers in plant science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Beyond Resistance Genes: Silencing Susceptibility.International journal of molecular sciences · 2026
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  4. Review
  5. Rootstock Selection for Resisting CucumberPlants (Basel, Switzerland) · 2025
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  8. Identification and Characterization of a Plant Endophytic FungusJournal of fungi (Basel, Switzerland) · 2024
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  9. Biocontrol Effect ofPlants (Basel, Switzerland) · 2023
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  10. Genome-wide identification and characterization ofFrontiers in plant science · 2023
    Article
  11. Article
  12. Article
  13. The Fungal EndophyteJournal of fungi (Basel, Switzerland) · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Transcriptome analysis of sesame-Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  18. Variation in Gene Expression between TwoPlants (Basel, Switzerland) · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mustafa EraymanDepartment of Biology, Faculty of Science, Mustafa Kemal University Hatay, Turkey.
Mine TurktasDepartment of Biology, Faculty of Science, Çankırı Karatekin University Çankırı, Turkey.
Guray AkdoganDepartment of Field Crops, Faculty of Agriculture, Ankara University Ankara, Turkey.
Tugba GurkokDepartment of Biology, Faculty of Science, Çankırı Karatekin University Çankırı, Turkey.
Behcet InalDepartment of Agricultural Biotechnology, Faculty of Agriculture, Siirt University Siirt, Turkey.
Emre IshakogluDepartment of Biology, Faculty of Science, Mustafa Kemal University Hatay, Turkey.
Emre IlhanDepartment of Biology, Faculty of Science, Mustafa Kemal University Hatay, Turkey.
Turgay UnverDepartment of Biology, Faculty of Science, Çankırı Karatekin University Çankırı, Turkey.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants are frequently exposed to microorganisms like fungi, bacteria, and viruses that cause biotic stresses. Fusarium head blight (FHB) is an economically risky wheat disease, which occurs upon Fusarium graminearum (Fg) infection. Moderately susceptible (cv. "Mizrak 98") and susceptible (cv. "Gun 91") winter type bread wheat cultivars were subjected to transcriptional profiling after exposure to Fg infection. To examine the early response to the pathogen in wheat, we measured gene expression alterations in mock and pathogen inoculated root crown of moderately susceptible (MS) and susceptible cultivars at 12 hours after inoculation (hai) using 12X135K microarray chip. The transcriptome analyses revealed that out of 39,179 transcripts, 3668 genes in microarray were significantly regulated at least in one time comparison. The majority of differentially regulated transcripts were associated with disease response and the gene expression mechanism. When the cultivars were compared, a number of transcripts and expression alterations varied within the cultivars. Especially membrane related transcripts were detected as differentially expressed. Moreover, diverse transcription factors showed significant fold change values among the cultivars. This study presented new insights to understand the early response of selected cultivars to the Fg at 12 hai. Through the KEGG analysis, we observed that the most altered transcripts were associated with starch and sucrose metabolism and gluconeogenesis pathways.

Indexed as

early responseFusarium graminearumgene expression profilingmicroarrayTriticum aestivum L

Identifiers

PMID26539199
PMCPMC4611148

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.