Evidence map›Paper›PMID 26539030›Full record

ArticleMolecular vision2015

Spectrum of germ-line RB1 gene mutations in Malaysian patients with retinoblastoma.

Mohd Khairul Nizam Mohd Khalid, Yusnita Yakob, Rohani Md Yasin, Keng Wee Teik, Ch'ng Gaik Siew, Jamalia Rahmat, Sunder Ramasamy, Joseph Alagaratnam

Abstract read
In one paragraph

Article in Molecular vision, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Correlation between FamilyDisease markers · 2021
    Article
  9. Spectrum ofFrontiers in genetics · 2020
    Article
  10. Spectrum of mutations in theMolecular vision · 2019
    Article
  11. Spectrum of germlineMolecular vision · 2018
    Article
  12. State of Art of Cancer Pharmacogenomics in Latin American Populations.International journal of molecular sciences · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mohd Khairul Nizam Mohd KhalidInstitute for Medical Research, Jalan Pahang, Kuala Lumpur, Malaysia.
Yusnita YakobInstitute for Medical Research, Jalan Pahang, Kuala Lumpur, Malaysia.
Rohani Md YasinInstitute for Medical Research, Jalan Pahang, Kuala Lumpur, Malaysia.
Keng Wee TeikDepartment of Genetics, Hospital Kuala Lumpur, Jalan Pahang, Kuala Lumpur, Malaysia.
Ch'ng Gaik SiewDepartment of Genetics, Hospital Kuala Lumpur, Jalan Pahang, Kuala Lumpur, Malaysia.
Jamalia RahmatDepartment of Ophthalmology, Hospital Kuala Lumpur, Jalan Pahang, Kuala Lumpur, Malaysia.
Sunder RamasamyDepartment of Ophthalmology, Hospital Kuala Lumpur, Jalan Pahang, Kuala Lumpur, Malaysia.
Joseph AlagaratnamDepartment of Ophthalmology, Hospital Kuala Lumpur, Jalan Pahang, Kuala Lumpur, Malaysia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThe availability of molecular genetic testing for retinoblastoma (RB) in Malaysia has enabled patients with a heritable predisposition to the disease to be identified, which thus improves the clinical management of these patients and their families. In this paper, we presented our strategy for performing molecular genetic testing of the RB1 gene and the findings from our first 2 years of starting this service.

methodsThe peripheral blood of 19 RB probands, including seven bilateral and 12 unilateral cases, was obtained, and genomic DNA was extracted. Analysis of the RB1 exons and the promoter region was conducted first using PCR and direct sequencing. Next, multiplex ligation-dependent probe amplification (MLPA) analysis was performed for patients whom the first results were negative. For patients whom either the first or second method results were positive, parental samples were analyzed to determine the origin of the mutation.

resultsTen RB1 mutations were identified in ten (52.6%) of the 19 probands (seven bilateral and three unilateral cases), of which 30.0% (3/10) was identified with MLPA. The detection rates in the bilateral and unilateral cases were 100.0% (7/7) and 25.0% (3/12), respectively. Three new RB1 mutations were discovered, two in patients with bilateral RB and one in patient with unilateral RB. Interestingly, all mutations detected with the PCR-sequencing method were predicted to create a premature stop codon. Eight mutations were proven to be de novo while one mutation was inherited from the mother in a family with a positive history of RB.

conclusionsOur results confirmed the heterogeneous nature of RB1 mutations and the predominantly de novo origin. The high prevalence of pathogenic truncating mutations was evident among local patients with RB. The combination of PCR sequencing and MLPA is recommended for sensitive identification of heritable RB cases.

Indexed as

Genetic Predisposition to DiseaseGerm-Line MutationAsian PeopleChild, PreschoolCodon, NonsenseDNA Mutational AnalysisExonsFemaleGene ExpressionGenetic TestingHumansInfantIntronsMalaysiaMalePromoter Regions, GeneticCodon, NonsenseRetinoblastoma Protein

Identifiers

PMID26539030
PMCPMC4605750

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.