Evidence map›Paper›PMID 26538152›Full record

ArticleChemical communications (Cambridge, England)2016

Evolution and characterization of a benzylguanine-binding RNA aptamer.

J Xu, T J Carrocci, A A Hoskins

Abstract read
In one paragraph

Article in Chemical communications (Cambridge, England), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Solid-Phase Synthesis of Megamolecules.Journal of the American Chemical Society · 2020
    Article
  3. Key Aspects of Nucleic Acid Library Design for in Vitro Selection.International journal of molecular sciences · 2018
    Review
  4. Aptamers for DNA Damage and Repair.International journal of molecular sciences · 2017
    Review
  5. Genetically encoded fluorescent tags.Molecular biology of the cell · 2017
    Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

J XuDepartment of Biochemistry, U. Wisconsin-Madison, 433 Babcock Dr., Madison, WI 53706, USA. ahoskins@wisc.edu.
T J Carrocci
A A Hoskins

Funding

BIOTECHNOLOGY TRAINING PROGRAMT32GM008349 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI FOX, BRIAN G · 1989 to 2019
$22.5M
NIGMS NIH HHS 5T32GM08349NIGMS NIH HHS T32 GM008349
6 · The paper itself

Abstract

Repurposing the "protein-labeling toolkit" for RNA research could be a pragmatic approach for developing new RNA-labeling methods. We have evolved an RNA aptamer that tightly binds benzylguanine (bG), the key ligand for the protein SNAP-tag. The aptamer tightly binds bG fluorophores and can be purified from cellular RNA with bG agarose under native conditions.

Indexed as

Aptamers, NucleotideBase SequenceChromatography, AgaroseGuanidinesMolecular StructureRNASELEX Aptamer TechniqueAptamers, NucleotidebenzylguanidineGuanidinesRNA

Identifiers

PMID26538152
PMCPMC5020705

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.