Evidence map›Paper›PMID 26538147›Full record

ArticleArthritis research & therapy2015

PTGER4 gene variant rs76523431 is a candidate risk factor for radiological joint damage in rheumatoid arthritis patients: a genetic study of six cohorts.

Luis Rodriguez-Rodriguez, Jose Ivorra-Cortes, F David Carmona, Javier Martín, Alejandro Balsa, Hanna W van Steenbergen, Annette H M van der Helm-van Mil, Isidoro González-Álvaro, Benjamín Fernandez-Gutiérrez

Open access · goldAbstract read
In one paragraph

Article in Arthritis research & therapy, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
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  6. Prostaglandin-cytokine crosstalk in chronic inflammation.British journal of pharmacology · 2019
    Review
  7. mPGES1-Dependent Prostaglandin EJournal of immunology (Baltimore, Md. : 1950) · 2018
    Article
  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Luis Rodriguez-RodriguezRheumatology Department and Heath Research Institute (IdISSC), Hospital Clinico San Carlos, c/o Prof. Martin Lagos s/n, 28040, Madrid, Spain. lrrodriguez@salud.madrid.org.
Jose Ivorra-CortesRheumatology Department, Hospital Universitario y Politécnico La Fe, Valencia, Spain. ivorra_jos@gva.es.
F David CarmonaInstituto de Parasitología y Biomedicina 'López-Neyra', CSIC, Granada, Spain. dcarmona@ipb.csic.es.
Javier MartínInstituto de Parasitología y Biomedicina 'López-Neyra', CSIC, Granada, Spain. martin@ipb.csic.es.
Alejandro BalsaRheumatology Department and Heath Research Institute (Idipaz), Hospital Universitario de La Paz, Madrid, Spain. alejandro.balsa@salud.madrid.org.
Hanna W van SteenbergenDepartment of Rheumatology, Leiden University Medical Centre, Leiden, The Netherlands. h.w.van_steenbergen@lumc.nl.
Annette H M van der Helm-van MilDepartment of Rheumatology, Leiden University Medical Centre, Leiden, The Netherlands. a.h.m.van_der_helm@lumc.nl.
Isidoro González-ÁlvaroRheumatology Service and Heath Research Institute (IP), Hospital Universitario de La Princesa, Madrid, Spain. isidoro.ga@ser.es.
Benjamín Fernandez-GutiérrezRheumatology Department and Heath Research Institute (IdISSC), Hospital Clinico San Carlos, c/o Prof. Martin Lagos s/n, 28040, Madrid, Spain. benjamin.fernandez@salud.madrid.org.
Instituto de Investigación Sanitaria del Hospital Clínico San Carlos · ESHospital Universitari i Politècnic La Fe · ESHospital Universitario de La Princesa · ESHospital Universitario La Paz · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionProstaglandin E receptor 4 (PTGER4) is implicated in immune regulation and bone metabolism. The aim of this study was to analyze its role in radiological joint damage in rheumatoid arthritis (RA).

methodsSix independent cohorts of patients with RA of European or North American descent were included, comprising 1789 patients with 5083 sets of X-rays. The Hospital Clínico San Carlos Rheumatoid Arthritis, Princesa Early Arthritis Register Longitudinal study, and Hospital Universitario de La Paz early arthritis (Spain) cohorts were used as discovery cohorts, and the Leiden Early Arthritis Clinic (The Netherlands), Wichita (United States), and National Databank for Rheumatic Diseases (United States and Canada) cohorts as replication cohorts. First, the PTGER4 rs6896969 single-nucleotide polymorphism (SNP) was genotyped using TaqMan assays and available Illumina Immunochip data and studied in the discovery and replication cohorts. Second, the PTGER4 gene and adjacent regions were analyzed using Immunochip genotyping data in the discovery cohorts. On the basis of pooled p values, linkage disequilibrium structure of the region, and location in regions with transcriptional properties, SNPs were selected for replication. The results from discovery, replication, and overall cohorts were pooled using inverse-variance-weighted meta-analysis. Influence of the polymorphisms on the overall radiological damage (constant effect) and on damage progression over time (time-varying effect) was analyzed.

resultsThe rs6896969 polymorphism showed a significant association with radiological damage in the constant effect pooled analysis of the discovery cohorts, although no significant association was observed in the replication cohorts or the overall pooled analysis. Regarding the analysis of the PTGER4 region, 976 variants were analyzed in the discovery cohorts. From the constant and time-varying effect analyses, 12 and 20 SNPs, respectively, were selected for replication. Only the rs76523431 variant showed a significant association with radiographic progression in the time-varying effect pooled analysis of the discovery, replication, and overall cohorts. The overall pooled effect size was 1.10 (95 % confidence interval 1.05-1.14, p = 2.10 × 10(-5)), meaning that radiographic yearly progression was 10 % greater for each copy of the minor allele.

conclusionsThe PTGER4 gene is a candidate risk factor for radiological progression in RA.

Indexed as

Arthritis, RheumatoidCohort StudiesDisease ProgressionFemaleGenetic Predisposition to DiseaseGenotypeHumansLongitudinal StudiesMaleMiddle AgedOligonucleotide Array Sequence AnalysisPolymorphism, Single NucleotideRadiographyReceptors, Prostaglandin E, EP4 SubtypeRisk FactorsPTGER4 protein, humanReceptors, Prostaglandin E, EP4 Subtype

Identifiers

PMID26538147
PMCPMC4634155
OpenAlexW2107898870

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.