Evidence map›Paper›PMID 26537360›Full record

ArticleNeuromolecular medicine2016

Targeted Gene Resequencing (Astrochip) to Explore the Tripartite Synapse in Autism-Epilepsy Phenotype with Macrocephaly.

Maria Marchese, Giulia Valvo, Francesca Moro, Federico Sicca, Filippo M Santorelli

Abstract readCase Reports
PubMed Publisher
In one paragraph

Article in Neuromolecular medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. GABAergic/Glycinergic and Glutamatergic Neurons Mediate Distinct Neurodevelopmental Phenotypes ofThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
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  5. The role ofJournal of pharmaceutical analysis · 2023
    Review
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  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Toward the Language Oscillogenome.Frontiers in psychology · 2018
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Maria MarcheseMolecular Medicine, IRCCS Stella Maris Foundation, Viale del Tirreno 331, via dei Giacinti 2, 56128, Calambrone, Pisa, Italy.
Giulia ValvoClinical Neurophysiology Laboratory, IRCCS Stella Maris Foundation, Viale del Tirreno 331, via dei Giacinti 2, 56128, Calambrone, Pisa, Italy.
Francesca MoroMolecular Medicine, IRCCS Stella Maris Foundation, Viale del Tirreno 331, via dei Giacinti 2, 56128, Calambrone, Pisa, Italy.
Federico SiccaClinical Neurophysiology Laboratory, IRCCS Stella Maris Foundation, Viale del Tirreno 331, via dei Giacinti 2, 56128, Calambrone, Pisa, Italy. federico.sicca@fsm.unipi.it.
Filippo M SantorelliMolecular Medicine, IRCCS Stella Maris Foundation, Viale del Tirreno 331, via dei Giacinti 2, 56128, Calambrone, Pisa, Italy. filippo3364@gmail.com.
Fondazione Stella Maris · IT

Funding

Telethon GGP11188
6 · The paper itself

Abstract

The frequent co-occurrence of autism spectrum disorders (ASD) and epilepsy, or paroxysmal EEG abnormalities, defines a condition termed autism-epilepsy phenotype (AEP). This condition results, in some cases , from dysfunctions of glial inwardly rectifying potassium channels (Kir), which are mainly expressed in astrocytes where they mediate neuron-glia communication. Macrocephaly is also often comorbid with autism-epilepsy (autism-epilepsy phenotype with macrocephaly, MAEP), and it is tempting to hypothesize that shared pathogenic mechanisms might explain concurrence of these conditions. In the present study, we assessed whether protein pathways involved, along with Kir channels, in astrocyte-neuron interaction at the tripartite synapse play a role in the etiopathogenesis of MAEP. Using a targeted resequencing methodology, we investigated the coding regions of 35 genes in 61 patients and correlated genetic results with clinical features. Variants were subdivided into 12 classes and clustered into four groups. We detected rare or previously unknown predicted deleterious missense changes in GJA1, SLC12A2, SNTA1, EFNA3, CNTNAP2, EPHA4, and STXBP1 in seven patients and two high-frequency variants in DLG1 in six individuals. We also found that a group of variants (predicted deleterious and non-coding), segregating with the comorbid MAEP/AEP subgroups, belong to proteins specifically involved in glutamate transport and metabolism (namely, SLC17A6, GRM8, and GLUL), as well as in potassium conductance (KCNN3). This "endophenotype-oriented" study, performed using a targeted strategy, helped to further delineate part of the complex genetic background of ASD, particularly in the presence of coexisting macrocephaly and/or epilepsy/paroxysmal EEG, and suggests that use of stringent clinical clustering might be an approach worth adopting in order to unravel the complex genomic data in neurodevelopmental disorders.

Indexed as

High-Throughput Nucleotide SequencingAstrocytesAutism Spectrum DisorderCell CommunicationChildChild, PreschoolCodon, NonsenseDNAEpilepsyFemaleFrameshift MutationGenetic Association StudiesHumansMaleMegalencephalyMutation, MissenseCodon, NonsenseDNANerve Tissue ProteinsPotassium Channels, Inwardly RectifyingAutismEpilepsyMacrocephalyNext-generation sequencingTripartite synapse

Identifiers

PMID26537360
OpenAlexW2100083737

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.