Evidence map›Paper›PMID 26535611›Full record

ArticleJournal of the American Chemical Society2015

A Rebeccamycin Analog Provides Plasmid-Encoded Niche Defense.

Ethan B Van Arnam, Antonio C Ruzzini, Clarissa S Sit, Cameron R Currie, Jon Clardy

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
5.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
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  5. Article
  6. Review
  7. Article
  8. Review
  9. Applied and environmental microbiology · 2023
    Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Polyene-ProducingFrontiers in microbiology · 2021
    Article
  17. Review
  18. Frontiers in microbiology · 2020
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Ethan B Van ArnamDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School , 240 Longwood Ave., Boston, Massachusetts 02115, United States.
Antonio C RuzziniDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School , 240 Longwood Ave., Boston, Massachusetts 02115, United States.
Clarissa S SitDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School , 240 Longwood Ave., Boston, Massachusetts 02115, United States.
Cameron R CurrieDepartment of Bacteriology, University of Wisconsin-Madison , 1550 Linden Dr., Madison, Wisconsin 53706, United States.
Jon ClardyDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School , 240 Longwood Ave., Boston, Massachusetts 02115, United States.
Harvard University · USUniversity of Wisconsin–Madison · US

Funding

Metabolomics driven discovery of drug leads from symbiotic bacteriaU19AI109673 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI ANDES, DAVID R, CURRIE, CAMERON ROBERT · 2014 to 2018
$16.2M
Novel therapeutic agents from the bacterial symbionts of Brazilian invertebratesU19TW009872 · FIC · HARVARD MEDICAL SCHOOL · PI CLARDY, JON, PUPO, MONICA T · 2014 to 2018
$4.4M
Molecule-to-gene approaches to new natural productsR01GM086258 · NIGMS · HARVARD MEDICAL SCHOOL · PI CLARDY, JON · 2008 to 2016
$3.6M
FIC NIH HHS U19 TW009872NIAID NIH HHS U19 AI09673NIAID NIH HHS U19 AI109673NIGMS NIH HHS R01 GM086258
6 · The paper itself

Abstract

Bacterial symbionts of fungus-growing ants occupy a highly specialized ecological niche and face the constant existential threat of displacement by another strain of ant-adapted bacteria. As part of a systematic study of the small molecules underlying this fraternal competition, we discovered an analog of the antitumor agent rebeccamycin, a member of the increasingly important indolocarbazole family. While several gene clusters consistent with this molecule's newly reported modification had previously been identified in metagenomic studies, the metabolite itself has been cryptic. The biosynthetic gene cluster for 9-methoxyrebeccamycin is encoded on a plasmid in a manner reminiscent of plasmid-derived peptide antimicrobials that commonly mediate antagonism among closely related Gram-negative bacteria.

Indexed as

ActinobacteriaAnti-Bacterial AgentsCarbazolesMicrobial Sensitivity TestsMolecular StructurePlasmidsAnti-Bacterial AgentsCarbazolesrebeccamycin

Identifiers

PMID26535611
PMCPMC4735871
OpenAlexW2394543137

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.