Evidence map›Paper›PMID 26531099›Full record

ArticleNature communications2015

ESRP2 controls an adult splicing programme in hepatocytes to support postnatal liver maturation.

Amruta Bhate, Darren J Parker, Thomas W Bebee, Jaegyoon Ahn, Waqar Arif, Edrees H Rashan, Sandip Chorghade, Anthony Chau, Jae-Hyung Lee, Sayeepriyadarshini Anakk and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 1 synthesis or guideline pooled it, 111 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Aberrant Splicing ofCirculation. Genomic and precision medicine · 2026
    Article
  4. Article
  5. Article
  6. Article
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  8. Article
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  11. Review
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  13. Review
  14. Characterization of Alternative Splicing in High-Risk Wilms' Tumors.International journal of molecular sciences · 2024
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Amruta BhateDepartment of Biochemistry and Medical Biochemistry, University of Illinois, Champaign, Illinois 61801, USA.
Darren J ParkerDepartment of Biochemistry and Medical Biochemistry, University of Illinois, Champaign, Illinois 61801, USA.
Thomas W BebeeDepartments of Medicine and Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Jaegyoon AhnDepartment of Integrative Biology and Physiology, University of California, Los Angeles, California 90095-7246, USA.
Waqar ArifDepartment of Biochemistry and Medical Biochemistry, University of Illinois, Champaign, Illinois 61801, USA.
Edrees H RashanDepartment of Biochemistry and Medical Biochemistry, University of Illinois, Champaign, Illinois 61801, USA.
Sandip ChorghadeDepartment of Biochemistry and Medical Biochemistry, University of Illinois, Champaign, Illinois 61801, USA.
Anthony ChauDepartment of Biochemistry and Medical Biochemistry, University of Illinois, Champaign, Illinois 61801, USA.
Jae-Hyung LeeDepartments of Medicine and Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Sayeepriyadarshini AnakkDepartment of Molecular and Integrative Physiology, University of Illinois, Champaign, Illinois 61801, USA.
Russ P CarstensDepartments of Medicine and Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA.
Xinshu XiaoDepartment of Integrative Biology and Physiology, University of California, Los Angeles, California 90095-7246, USA.
Auinash KalsotraDepartment of Biochemistry and Medical Biochemistry, University of Illinois, Champaign, Illinois 61801, USA.ORCID http://orcid.org/0000-0002-1011-0006
University of Illinois Urbana-Champaign · USUniversity of Pennsylvania · USUniversity of California, Los Angeles · US

Funding

TRANSGENIC AND CHIMERIC MOUSE COREP30DK050306 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI REBECCA G WELLS · 1997 to 2026
$32.5M
Post-transcriptional mechanisms of gene regulation in cardiac cell growth and developmentR01HL126845 · NHLBI · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI KALSOTRA, AUINASH · 2015 to 2023
$3.5M
Functional genetic variations in splicing regulationR01HG006264 · NHGRI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI XIAO, XINSHU GRACE · 2012 to 2016
$1.5M
Functions of Epithelial Splicing Regulatory Proteins and their role in the EMTR01GM088809 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI CARSTENS, RUSS PAUL · 2009 to 2013
$1.5M
NHGRI NIH HHS R01 HG006264NHGRI NIH HHS R01HG006264NHLBI NIH HHS R01 HL126845NHLBI NIH HHS R01HL126845NIDDK NIH HHS P30 DK050306NIDDK NIH HHS P30-DK050306NIGMS NIH HHS R01 GM088809NIGMS NIH HHS R01-GM088809
6 · The paper itself

Abstract

Although major genetic networks controlling early liver specification and morphogenesis are known, the mechanisms responsible for postnatal hepatic maturation are poorly understood. Here we employ global analyses of the mouse liver transcriptome to demonstrate that postnatal remodelling of the liver is accompanied by large-scale transcriptional and post-transcriptional transitions that are cell-type-specific and temporally coordinated. Combining detailed expression analyses with gain- and loss-of-function studies, we identify epithelial splicing regulatory protein 2 (ESRP2) as a conserved regulatory factor that controls the neonatal-to-adult switch of ∼20% of splice isoforms in mouse and human hepatocytes. The normal shift in splicing coincides tightly with dramatic postnatal induction of ESRP2 in hepatocytes. We further demonstrate that forced expression of ESRP2 in immature mouse and human hepatocytes is sufficient to drive a reciprocal shift in splicing and causes various physiological abnormalities. These findings define a direct role for ESRP2 in the generation of conserved repertoires of adult splice isoforms that facilitate terminal differentiation and maturation of hepatocytes.

Indexed as

Gene Expression Regulation, DevelopmentalAlternative SplicingAnimalsBlotting, WesternCell DifferentiationHepatocytesHumansImmunohistochemistryIn Situ HybridizationLiverMiceMice, KnockoutProtein IsoformsReverse Transcriptase Polymerase Chain ReactionRNA-Binding ProteinsRNA Processing, Post-TranscriptionalESRP2 protein, humanESRP2 protein, mouseProtein IsoformsRNA-Binding Proteins

Identifiers

PMID26531099
PMCPMC4635967
OpenAlexW2223556930

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.