Evidence map›Paper›PMID 26529022›Full record

ArticlePathogens (Basel, Switzerland)2015

Identification of Epstein-Barr Virus Replication Proteins in Burkitt's Lymphoma Cells.

Chris Traylen, Sharada Ramasubramanyan, Jianmin Zuo, Martin Rowe, Rajaei Almohammad, Kate Heesom, Steve M M Sweet, David A Matthews, Alison J Sinclair

Open access · goldAbstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Identification of anti-Epstein-Barr virus (EBV) antibody signature in EBV-associated gastric carcinoma.Gastric cancer : official journal of the International Gastric Cancer Association and the Japanese Gastric Cancer Association · 2021
    Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Chris TraylenSchool of Life Sciences, University of Sussex, Brighton BN1 9QG, UK. C.Traylen@sussex.ac.uk.
Sharada RamasubramanyanSchool of Life Sciences, University of Sussex, Brighton BN1 9QG, UK. sramasubramanyan@gmail.com.
Jianmin ZuoSchool of Cancer Sciences and Centre for Human Virology, University of Birmingham College of Medical and Dental Sciences, Edgbaston, Birmingham B15 2TT, UK. j.zuo@bham.ac.uk.
Martin RoweSchool of Cancer Sciences and Centre for Human Virology, University of Birmingham College of Medical and Dental Sciences, Edgbaston, Birmingham B15 2TT, UK. m.rowe@bham.ac.uk.
Rajaei AlmohammadSchool of Life Sciences, University of Sussex, Brighton BN1 9QG, UK. r.almohammed@sussex.ac.uk.
Kate HeesomSchool of Cellular and Molecular Medicine, University of Bristol, Medical Sciences Building, Bristol BS8 1TD, UK. K.Heesom@bristol.ac.uk.
Steve M M SweetGenome Damage and Stability Centre, University of Sussex, Brighton BN1 9RQ, UK. ss641@sussex.ac.uk.
David A MatthewsSchool of Cellular and Molecular Medicine, University of Bristol, Medical Sciences Building, Bristol BS8 1TD, UK. padam@bristol.ac.uk.
Alison J SinclairSchool of Life Sciences, University of Sussex, Brighton BN1 9QG, UK. a.j.sinclair@sussex.ac.uk.
University of Sussex · GBUniversity of Birmingham · GBUniversity of Bristol · GB

Funding

Medical Research Council G0901755Medical Research Council G1100257Medical Research Council MR/J001708/1
6 · The paper itself

Abstract

The working model to describe the mechanisms used to replicate the cancer-associated virus Epstein-Barr virus (EBV) is partly derived from comparisons with other members of the Herpes virus family. Many genes within the EBV genome are homologous across the herpes virus family. Published transcriptome data for the EBV genome during its lytic replication cycle show extensive transcription, but the identification of the proteins is limited. We have taken a global proteomics approach to identify viral proteins that are expressed during the EBV lytic replication cycle. We combined an enrichment method to isolate cells undergoing EBV lytic replication with SILAC-labeling coupled to mass-spectrometry and identified viral and host proteins expressed during the OPEN ACCESS Pathogens 2015, 4 740 EBV lytic replication cycle. Amongst the most frequently identified viral proteins are two components of the DNA replication machinery, the single strand DNA binding protein BALF2, DNA polymerase accessory protein BMRF1 and both subunits of the viral ribonucleoside-diphosphate reductase enzyme (BORF2 and BaRF1). An additional 42 EBV lytic cycle proteins were also detected. This provides proteomic identification for many EBV lytic replication cycle proteins and also identifies post-translational modifications.

Indexed as

cancerEpstein-Barrherpesproteomereplicationvirus

Identifiers

PMID26529022
PMCPMC4693162
OpenAlexW2147846820

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.