Evidence map›Paper›PMID 26528858›Full record

ArticleOncotarget2016

Mutually exclusive mutations in NOTCH1 and PIK3CA associated with clinical prognosis and chemotherapy responses of esophageal squamous cell carcinoma in China.

Bin Song, Heyang Cui, Yaoping Li, Caixia Cheng, Bin Yang, Fang Wang, Pengzhou Kong, Hongyi Li, Ling Zhang, Zhiwu Jia and 31 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 26 citations in OpenAlex.

  1. No significant association between PIK3CA mutation and survival of esophageal squamous cell carcinoma: A meta-analysis.Journal of Huazhong University of Science and Technology. Medical sciences = Hua zhong ke ji da xue xue bao. Yi xue Ying De wen ban = Huazhong keji daxue xuebao. Yixue Yingdewen ban · 2017
    Pooled it
  2. Review
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  8. Deleterious mutations in esophageal carcinoma cuniculatum detected by next generation sequencing.International journal of clinical and experimental pathology · 2022
    Article
  9. NOTCH and Esophageal Squamous Cell Carcinoma.Advances in experimental medicine and biology · 2021
    Review
  10. Article
  11. Article
  12. Review
  13. Article
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  15. Review
  16. Review
  17. MicroRNA-21 promotes cell proliferation, migration, and resistance to apoptosis through PTEN/PI3K/AKT signaling pathway in esophageal cancer.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

41 authors at 7 institutions in 1 country.

Bin SongTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Heyang CuiTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Yaoping LiTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Caixia ChengTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Bin YangTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Fang WangTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Pengzhou KongTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Hongyi LiTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Ling ZhangTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Zhiwu JiaTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Yanghui BiTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Jiaqian WangBGI-Shenzhen, Shenzhen, Guangdong, China.
Yong ZhouBGI-Shenzhen, Shenzhen, Guangdong, China.
Jing LiuTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Juan WangTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Zhenxiang ZhaoTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Yanyan ZhangTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Xiaoling HuTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Ruyi ShiTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Jie YangTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Haiyan LiuTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Ting YanTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Yike LiTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Enwei XuTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Yu QianTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Yanfeng XiDepartment of Pathology, Shanxi Cancer Hospital, Taiyuan, Shanxi, China.
Shiping GuoDepartment of Tumor Surgery, Shanxi Cancer Hospital, Taiyuan, Shanxi, China.
Yunqing ChenDepartment of Tumor Surgery, Shanxi Cancer Hospital, Taiyuan, Shanxi, China.
Jinfen WangDepartment of Pathology, Shanxi Cancer Hospital, Taiyuan, Shanxi, China.
Guodong LiDepartment of Pathology, Shanxi Cancer Hospital, Taiyuan, Shanxi, China.
Jianfang LiangDepartment of Pathology, The First Hospital, Shanxi Medical University, Taiyuan, Shanxi, China.
Junmei JiaDepartment of Oncology, The First Hospital, Shanxi Medical University, Taiyuan, Shanxi, China.
Xing ChenDepartment of Endoscopy, Shanxi Provincial People's Hospital, Taiyuan, Shanxi, China.
Jiansheng GuoDepartment of General Surgery, The First Hospital, Shanxi Medical University, Taiyuan, Shanxi, China.
Tong WangDepartment of Statistics, Shanxi Medical University, Taiyuan, Shanxi, China.
Yanbo ZhangDepartment of Statistics, Shanxi Medical University, Taiyuan, Shanxi, China.
Qingshan LiSchool of Pharmaceutical Sciences, Shanxi Medical University, Taiyuan, Shanxi, China.
Chuangui WangKey Laboratory of Medical Cell Biology, College of Translational Medicine, China Medical University, Shenyang, China.
Xiaolong ChengTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Qimin ZhanState Key Laboratory of Molecular Oncology, Cancer Institute and Cancer Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Yongping CuiTranslational Medicine Research Center, Shanxi Medical University, Taiyuan, Shanxi, China.
Shanxi Medical University · CNFirst Hospital of Shanxi Medical University · CNShanxi Provincial Cancer Hospital · CNBGI Group (China) · CNChina Medical University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNShaanxi Provincial People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRecurrent genetic abnormalities that correlate with clinical features could be used to determine patients' prognosis, select treatments and predict responses to therapy. Esophageal squamous cell carcinoma (ESCC) contains genomic alterations of undefined clinical significance. We aimed to identify mutually exclusive mutations that are frequently detected in ESCCs and characterized their associations with clinical variables.

methodsWe analyzed next-generation-sequencing data from 104 ESCCs from Taihang Mountain region of China; 96 pairs were selected for deep target-capture-based validation and analysis of clinical and pathology data. We used model proposed by Szczurek to identify exclusive mutations and to associate these with pathology findings. Univariate and multivariate analyses with Cox proportional hazards model were used to examine the association between mutations and overall survival and response to chemotherapy. Findings were validated in an analysis of samples from 89 patients with ESCC from Taihang Mountain.

resultsWe identified statistically significant mutual exclusivity between mutations in NOTCH1 and PIK3CA in ESCC samples. Mutations in NOTCH1 were associated with well-differentiated, early-stage malignancy and less metastasis to regional lymph nodes. Nonetheless, patients with NOTCH1 mutations had shorter survival times than patients without NOTCH1 mutations, and failed to respond to chemotherapy. In contrast, patients with mutations in PIK3CA had better responses to chemotherapy and longer survival times than patients without PIK3CA mutations.

conclusionsIn a genetic analysis of ESCCs from patients in China, we identified mutually exclusive mutations in NOTCH1 and PIK3CA. These findings might increase our understanding of ESCC development and be used as prognostic factors.

Indexed as

AgedAntineoplastic Combined Chemotherapy ProtocolsApoptosisBiomarkers, TumorBlotting, WesternCarcinoma, Squamous CellCell ProliferationChinaCisplatinClass I Phosphatidylinositol 3-KinasesEsophageal NeoplasmsFemaleFluorouracilFollow-Up StudiesGenomicsHumansBiomarkers, TumorCisplatinClass I Phosphatidylinositol 3-KinasesFluorouracilNOTCH1 protein, humanPaclitaxelPhosphatidylinositol 3-KinasesPIK3CA protein, humanReceptor, Notch1RNA, Messengeresophageal cancermutational exclusivityoncogenesignificantly mutated genes

Identifiers

PMID26528858
PMCPMC4823130
OpenAlexW1962953698

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.