Evidence map›Paper›PMID 26528268›Full record

ArticleFrontiers in microbiology2015

Salt resistance genes revealed by functional metagenomics from brines and moderate-salinity rhizosphere within a hypersaline environment.

Salvador Mirete, Merit R Mora-Ruiz, María Lamprecht-Grandío, Carolina G de Figueras, Ramon Rosselló-Móra, José E González-Pastor

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 51 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Salvador MireteLaboratory of Molecular Adaptation, Department of Molecular Evolution, Centro de Astrobiología, Consejo Superior de Investigaciones Científicas - Instituto Nacional de Técnica Aeroespacial, Madrid Spain.
Merit R Mora-RuizMarine Microbiology Group, Department of Ecology and Marine Resources, Mediterranean Institute for Advanced Studies, Consejo Superior de Investigaciones Científicas - Universidad de las Islas Baleares, Esporles Spain.
María Lamprecht-GrandíoLaboratory of Molecular Adaptation, Department of Molecular Evolution, Centro de Astrobiología, Consejo Superior de Investigaciones Científicas - Instituto Nacional de Técnica Aeroespacial, Madrid Spain.
Carolina G de FiguerasLaboratory of Molecular Adaptation, Department of Molecular Evolution, Centro de Astrobiología, Consejo Superior de Investigaciones Científicas - Instituto Nacional de Técnica Aeroespacial, Madrid Spain.
Ramon Rosselló-MóraMarine Microbiology Group, Department of Ecology and Marine Resources, Mediterranean Institute for Advanced Studies, Consejo Superior de Investigaciones Científicas - Universidad de las Islas Baleares, Esporles Spain.
José E González-PastorLaboratory of Molecular Adaptation, Department of Molecular Evolution, Centro de Astrobiología, Consejo Superior de Investigaciones Científicas - Instituto Nacional de Técnica Aeroespacial, Madrid Spain.
Centro de Astrobiología · ESMediterranean Institute for Advanced Studies · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hypersaline environments are considered one of the most extreme habitats on earth and microorganisms have developed diverse molecular mechanisms of adaptation to withstand these conditions. The present study was aimed at identifying novel genes from the microbial communities of a moderate-salinity rhizosphere and brine from the Es Trenc saltern (Mallorca, Spain), which could confer increased salt resistance to Escherichia coli. The microbial diversity assessed by pyrosequencing of 16S rRNA gene libraries revealed the presence of communities that are typical in such environments and the remarkable presence of three bacterial groups never revealed as major components of salt brines. Metagenomic libraries from brine and rhizosphere samples, were transferred to the osmosensitive strain E. coli MKH13, and screened for salt resistance. Eleven genes that conferred salt resistance were identified, some encoding for well-known proteins previously related to osmoadaptation such as a glycerol transporter and a proton pump, whereas others encoded proteins not previously related to this function in microorganisms such as DNA/RNA helicases, an endonuclease III (Nth) and hypothetical proteins of unknown function. Furthermore, four of the retrieved genes were cloned and expressed in Bacillus subtilis and they also conferred salt resistance to this bacterium, broadening the spectrum of bacterial species in which these genes can function. This is the first report of salt resistance genes recovered from metagenomes of a hypersaline environment.

Indexed as

brineDNA repairfunctional metagenomicshypersalinerhizospheresalternsalt resistance genesstress response

Identifiers

PMID26528268
PMCPMC4602150
OpenAlexW1963459525

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.