Evidence map›Paper›PMID 26527546›Full record

ArticlePigment cell & melanoma research2016

Rab9A is required for delivery of cargo from recycling endosomes to melanosomes.

Sarmistha Mahanty, Keerthana Ravichandran, Praneeth Chitirala, Jyothi Prabha, Riddhi Atul Jani, Subba Rao Gangi Setty

Open access · hybridAbstract read
In one paragraph

Article in Pigment cell & melanoma research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 40 citations in OpenAlex.

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  11. Hexa-Longin domain scaffolds for inter-Rab signalling.Bioinformatics (Oxford, England) · 2020
    Article
  12. Review
  13. VARP and Rab9 Are Dispensable for the Rab32/BLOC-3 DependentFrontiers in cellular and infection microbiology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Sarmistha MahantyDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India.
Keerthana RavichandranDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India.
Praneeth ChitiralaDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India.
Jyothi PrabhaDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India.
Riddhi Atul JaniDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India.
Subba Rao Gangi SettyDepartment of Microbiology and Cell Biology, Indian Institute of Science, Bangalore, India.
Indian Institute of Science Bangalore · IN

Funding

DBT-Wellcome Trust India Alliance 500122-Z-09-ZWellcome Trust 500122/Z/09/Z
6 · The paper itself

Abstract

Melanosomes are a type of lysosome-related organelle that is commonly defective in Hermansky-Pudlak syndrome. Biogenesis of melanosomes is regulated by BLOC-1, -2, -3, or AP-1, -3 complexes, which mediate cargo transport from recycling endosomes to melanosomes. Although several Rab GTPases have been shown to regulate these trafficking steps, the precise role of Rab9A remains unknown. Here, we found that a cohort of Rab9A associates with the melanosomes and its knockdown in melanocytes results in hypopigmented melanosomes due to mistargeting of melanosomal proteins to lysosomes. In addition, the Rab9A-depletion phenotype resembles Rab38/32-inactivated or BLOC-3-deficient melanocytes, suggesting that Rab9A works in line with BLOC-3 and Rab38/32 during melanosome cargo transport. Furthermore, silencing of Rab9A, Rab38/32 or its effector VARP, or BLOC-3-deficiency in melanocytes decreased the length of STX13-positive recycling endosomal tubules and targeted the SNARE to lysosomes. This result indicates a defect in directing recycling endosomal tubules to melanosomes. Thus, Rab9A and its co-regulatory GTPases control STX13-mediated cargo delivery to maturing melanosomes.

Indexed as

EndocytosisAnimalsEndosomesGene Knockdown TechniquesLysosomesMelanocytesMelanosomesMiceModels, BiologicalPigmentationProtein Transportrab GTP-Binding ProteinsRNA, Small InterferingRab38 protein, mouserab9 protein, mouserab GTP-Binding ProteinsRNA, Small InterferingAP-3BLOC-1BLOC-2BLOC-3HPSRab38/Rab32Rab9A

Identifiers

PMID26527546
PMCPMC4690521
OpenAlexW1936978811

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.