Evidence map›Paper›PMID 26525576›Full record

ArticleScientific reports2015

Multi-Omic Dynamics Associate Oxygenic Photosynthesis with Nitrogenase-Mediated H2 Production in Cyanothece sp. ATCC 51142.

Hans C Bernstein, Moiz A Charania, Ryan S McClure, Natalie C Sadler, Matthew R Melnicki, Eric A Hill, Lye Meng Markillie, Carrie D Nicora, Aaron T Wright, Margaret F Romine and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Hans C BernsteinChemical and Biological Signature Science, Pacific Northwest National Laboratory, Richland, WA 99352.
Moiz A CharaniaBiological Sciences Division, Pacific Northwest National Laboratory, Richland WA, 99352.
Ryan S McClureBiological Sciences Division, Pacific Northwest National Laboratory, Richland WA, 99352.
Natalie C SadlerBiological Sciences Division, Pacific Northwest National Laboratory, Richland WA, 99352.
Matthew R MelnickiBiological Sciences Division, Pacific Northwest National Laboratory, Richland WA, 99352.
Eric A HillBiological Sciences Division, Pacific Northwest National Laboratory, Richland WA, 99352.
Lye Meng MarkillieBiological Sciences Division, Pacific Northwest National Laboratory, Richland WA, 99352.
Carrie D NicoraBiological Sciences Division, Pacific Northwest National Laboratory, Richland WA, 99352.
Aaron T WrightBiological Sciences Division, Pacific Northwest National Laboratory, Richland WA, 99352.
Margaret F RomineBiological Sciences Division, Pacific Northwest National Laboratory, Richland WA, 99352.
Alexander S BeliaevBiological Sciences Division, Pacific Northwest National Laboratory, Richland WA, 99352.
Pacific Northwest National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To date, the proposed mechanisms of nitrogenase-driven photosynthetic H2 production by the diazotrophic unicellular cyanobacterium Cyanothece sp. ATCC 51142 have assumed that reductant and ATP requirements are derived solely from glycogen oxidation and cyclic-electron flow around photosystem I. Through genome-scale transcript and protein profiling, this study presents and tests a new hypothesis on the metabolic relationship between oxygenic photosynthesis and nitrogenase-mediated H2 production in Cyanothece 51142. Our results show that net-positive rates of oxygenic photosynthesis and increased expression of photosystem II reaction centers correspond and are synchronized with nitrogenase expression and H2 production. These findings provide a new and more complete view on the metabolic processes contributing to the energy budget of photosynthetic H2 production and highlight the role of concurrent photocatalytic H2O oxidation as a participating process.

Indexed as

Bacterial ProteinsCluster AnalysisCyanotheceEnergy MetabolismGene Expression ProfilingGlycogenHydrogenHydrogenaseKineticsNitrogenaseOxidation-ReductionOxygenPhotosynthesisPhotosystem II Protein ComplexProteomicsRNA, MessengerBacterial ProteinsGlycogenHydrogenHydrogenaseNitrogenaseOxygenPhotosystem II Protein ComplexRNA, MessengerWater

Identifiers

PMID26525576
PMCPMC4630603
OpenAlexW2288569206

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.