Evidence map›Paper›PMID 26525058›Full record

ArticleParticle and fibre toxicology2015

Proteomic analysis of protein carbonylation: a useful tool to unravel nanoparticle toxicity mechanisms.

Marc D Driessen, Sarah Mues, Antje Vennemann, Bryan Hellack, Anne Bannuscher, Vishalini Vimalakanthan, Christian Riebeling, Rainer Ossig, Martin Wiemann, Jürgen Schnekenburger and 4 more

Abstract read
In one paragraph

Article in Particle and fibre toxicology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Environmental science. Nano · 2024
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  3. Review
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  5. Review
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  7. Article
  8. Refractive Index Changes of Cells and Cellular Compartments Upon Paraformaldehyde Fixation Acquired by Tomographic Phase Microscopy.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2021
    Article
  9. Article
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  16. Review
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  18. Article
  19. Systems Biology to Support Nanomaterial Grouping.Advances in experimental medicine and biology · 2017
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Marc D DriessenDepartment of Chemicals and Product Safety, German Federal Institute for Risk Assessment (BfR), Berlin, Germany. marc.driessen@bfr.bund.de.
Sarah MuesBiomedical Technology Center, Westfälische Wilhelms-University, Münster, Germany. sarah.mues@uni-muenster.de.
Antje VennemannIBE R&D gGmbH, Institute for Lung Health, Münster, Germany. vennemann@ibe-ms.de.
Bryan HellackInstitute of Energy and Environmental Technology (IUTA) e.V., Air Quality & Sustainable Nanotechnology, Duisburg, Germany. hellack@iuta.de.
Anne BannuscherDepartment of Chemicals and Product Safety, German Federal Institute for Risk Assessment (BfR), Berlin, Germany. anne.bannuscher@bfr.bund.de.
Vishalini VimalakanthanDepartment of Chemicals and Product Safety, German Federal Institute for Risk Assessment (BfR), Berlin, Germany. vishalini.v@fu-berlin.de.
Christian RiebelingDepartment of Chemicals and Product Safety, German Federal Institute for Risk Assessment (BfR), Berlin, Germany. christian.riebeling@bfr.bund.de.
Rainer OssigBiomedical Technology Center, Westfälische Wilhelms-University, Münster, Germany. ossig@uni-muenster.de.
Martin WiemannIBE R&D gGmbH, Institute for Lung Health, Münster, Germany. martin.wiemann@ibe-ms.de.
Jürgen SchnekenburgerBiomedical Technology Center, Westfälische Wilhelms-University, Münster, Germany. schnekenburger@uni-muenster.de.
Thomas A J KuhlbuschInstitute of Energy and Environmental Technology (IUTA) e.V., Air Quality & Sustainable Nanotechnology, Duisburg, Germany. schnekenburger@uni-muenster.de.
Bernhard RenardRobert-Koch-Institut (RKI), Junior Research Group Bioinformatics, Berlin, Germany. RenardB@rki.de.
Andreas LuchDepartment of Chemicals and Product Safety, German Federal Institute for Risk Assessment (BfR), Berlin, Germany. andreas.luch@bfr.bund.de.
Andrea HaaseDepartment of Chemicals and Product Safety, German Federal Institute for Risk Assessment (BfR), Berlin, Germany. andrea.haase@bfr.bund.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOxidative stress, a commonly used paradigm to explain nanoparticle (NP)-induced toxicity, results from an imbalance between reactive oxygen species (ROS) generation and detoxification. As one consequence, protein carbonyl levels may become enhanced. Thus, the qualitative and quantitative description of protein carbonylation may be used to characterize how biological systems respond to oxidative stress induced by NPs.

methodsWe investigated a representative panel of 24 NPs including functionalized amorphous silica (6), zirconium dioxide (4), silver (4), titanium dioxide (3), zinc oxide (2), multiwalled carbon nanotubes (3), barium sulfate and boehmite. Surface reactivities of all NPs were studied in a cell-free system by electron spin resonance (ESR). NRK-52E cells were treated with all NPs, analyzed for viability (WST-1 assay) and intracellular ROS production (DCFDA assay). Carbonylated proteins were assessed by 1D and/or 2D immunoblotting and identified by matrix assisted laser desorption time-of-flight mass spectrometry (MALDI-TOF/TOF). In parallel, tissue homogenates from rat lungs intratracheally instilled with silver NPs were studied.

resultsEleven NPs induced elevated levels of carbonylated proteins. This was in good agreement with the surface reactivity of the NPs as obtained by ESR and the reduction in cell viability as assessed by WST-1 assay. By contrast, results obtained by DCFDA assay were deviating. Each NP induced an individual pattern of protein carbonyls on 2D immunoblots. Affected proteins comprised cytoskeletal components, proteins being involved in stress response, or cytoplasmic enzymes of central metabolic pathways such as glycolysis and gluconeogenesis. Furthermore, induction of carbonyls upon silver NP treatment was also verified in rat lung tissue homogenates.

conclusionsAnalysis of protein carbonylation is a versatile and sensitive method to describe NP-induced oxidative stress and, therefore, can be used to identify NPs of concern. Furthermore, detailed information about compromised proteins may aid in classifying NPs according to their mode of action.

Indexed as

ProteomicsAnimalsCluster AnalysisKetonesLungNanoparticlesPrincipal Component AnalysisRatsKetones

Identifiers

PMID26525058
PMCPMC4630844

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.