Evidence map›Paper›PMID 26524303›Full record

ArticleJournal of synchrotron radiation2015

In situ X-ray data collection and structure phasing of protein crystals at Structural Biology Center 19-ID.

Karolina Michalska, Kemin Tan, Changsoo Chang, Hui Li, Catherine Hatzos-Skintges, Michael Molitsky, Randy Alkire, Andrzej Joachimiak

Open access · bronzeAbstract read
In one paragraph

Article in Journal of synchrotron radiation, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. In situ crystal data-collection and ligand-screening system at SPring-8.Acta crystallographica. Section F, Structural biology communications · 2022
    Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Karolina MichalskaMidwest Center for Structural Genomics, Biosciences Division, Argonne National Laboratory, USA.
Kemin TanMidwest Center for Structural Genomics, Biosciences Division, Argonne National Laboratory, USA.
Changsoo ChangMidwest Center for Structural Genomics, Biosciences Division, Argonne National Laboratory, USA.
Hui LiMidwest Center for Structural Genomics, Biosciences Division, Argonne National Laboratory, USA.
Catherine Hatzos-SkintgesMidwest Center for Structural Genomics, Biosciences Division, Argonne National Laboratory, USA.
Michael MolitskyStructural Biology Center, Biosciences Division, Argonne National Laboratory, USA.
Randy AlkireStructural Biology Center, Biosciences Division, Argonne National Laboratory, USA.
Andrzej JoachimiakMidwest Center for Structural Genomics, Biosciences Division, Argonne National Laboratory, USA.
Argonne National Laboratory · USJoint Center for Structural Genomics · USUniversity of Chicago · US

Funding

Midwest Center for Structural GenomicsU54GM094585 · NIGMS · UNIVERSITY OF CHICAGO · PI MINOR, WLADEK · 2010 to 2014
$33.7M
NIGMS NIH HHS GM094585NIGMS NIH HHS U54 GM094585
6 · The paper itself

Abstract

A prototype of a 96-well plate scanner for in situ data collection has been developed at the Structural Biology Center (SBC) beamline 19-ID, located at the Advanced Photon Source, USA. The applicability of this instrument for protein crystal diffraction screening and data collection at ambient temperature has been demonstrated. Several different protein crystals, including selenium-labeled, were used for data collection and successful SAD phasing. Without the common procedure of crystal handling and subsequent cryo-cooling for data collection at T = 100 K, crystals in a crystallization buffer show remarkably low mosaicity (<0.1°) until deterioration by radiation damage occurs. Data presented here show that cryo-cooling can cause some unexpected structural changes. Based on the results of this study, the integration of the plate scanner into the 19-ID end-station with automated controls is being prepared. With improvement of hardware and software, in situ data collection will become available for the SBC user program including remote access.

Indexed as

Computer SimulationCrystallizationCrystallography, X-RayEquipment DesignEquipment Failure AnalysisModels, ChemicalModels, MolecularPhase TransitionProtein Array AnalysisProteinsProteinscrystallization platein situsynchrotron data collection

Identifiers

PMID26524303
PMCPMC4629866
OpenAlexW1930229907

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.