Evidence map›Paper›PMID 26523474›Full record

ArticleCurrent protocols in toxicology2015

Seahorse Xfe 24 Extracellular Flux Analyzer-Based Analysis of Cellular Respiration in Caenorhabditis elegans.

Anthony L Luz, Latasha L Smith, John P Rooney, Joel N Meyer

Abstract read
In one paragraph

Article in Current protocols in toxicology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed.

  1. Article
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  3. Tardigrade Dsup extendsScience advances · 2025
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  5. Rescue of a Rotenone Model of Parkinson's Disease inInternational journal of molecular sciences · 2025
    Article
  6. Review
  7. A novelBiology methods & protocols · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Anthony L LuzNicholas School of the Environment, Duke University, Durham, North Carolina.
Latasha L SmithDepartment of Pharmacology and Cancer Biology, Duke University School of Medicine, Durham, North Carolina.
John P RooneyNicholas School of the Environment, Duke University, Durham, North Carolina.
Joel N MeyerNicholas School of the Environment, Duke University, Durham, North Carolina.

Funding

Zebrafish as a Detector of Organophosphate ExposureP42ES010356 · NIEHS · DUKE UNIVERSITY · PI EDWARD D LEVIN · 2000 to 2026
$56.2M
Integrated Toxicology ProgramT32ES007031 · NIEHS · DUKE UNIVERSITY · PI DI GIULIO, RICHARD · 1985 to 2007
$2.4M
The Role of Mitochondrial DNA Damage in NeurodegenerationR01ES017540 · NIEHS · DUKE UNIVERSITY · PI MEYER, JOEL NEWMAN · 2011 to 2015
$1.8M
NIEHS NIH HHS P42 ES0101356-10A2NIEHS NIH HHS P42 ES010356NIEHS NIH HHS R01 ES017540NIEHS NIH HHS R01-ES017540-01A2NIEHS NIH HHS T32 ES007031
6 · The paper itself

Abstract

Mitochondria are critical for their role in ATP production as well as multiple nonenergetic functions, and mitochondrial dysfunction is causal in myriad human diseases. Less well appreciated is the fact that mitochondria integrate environmental and intercellular as well as intracellular signals to modulate function. Because mitochondria function in an organismal milieu, there is need for assays capable of rapidly assessing mitochondrial health in vivo. Here, using the Seahorse XF(e) 24 Extracellular Flux Analyzer and the pharmacological inhibitors dicyclohexylcarbodiimide (DCCD, ATP synthase inhibitor), carbonyl cyanide-p-trifluoromethoxyphenylhydrazone (FCCP, mitochondrial uncoupler), and sodium azide (cytochrome c oxidase inhibitor), we describe how to obtain in vivo measurements of the fundamental parameters [basal oxygen consumption rate (OCR), ATP-linked respiration, maximal OCR, spare respiratory capacity, and proton leak] of the mitochondrial respiratory chain in the model organism Caenorhabditis elegans.

Indexed as

Adenosine TriphosphateAnimalsBiosensing TechniquesCaenorhabditis elegansCarbonyl Cyanide m-Chlorophenyl HydrazoneDicyclohexylcarbodiimideElectron TransportElectron Transport Complex IVMitochondriaMitochondrial Proton-Translocating ATPasesOxygen ConsumptionSodium AzideAdenosine Triphosphatecarbonylcyanide 4-trifluoromethoxyphenylhydrazoneCarbonyl Cyanide m-Chlorophenyl HydrazoneDicyclohexylcarbodiimideElectron Transport Complex IVMitochondrial Proton-Translocating ATPasesSodium AzideCaenorhabditis elegansmitochondrial respirationmitochondrial toxicitySeahorse XFe24

Identifiers

PMID26523474
PMCPMC4632645

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.