Evidence map›Paper›PMID 26522442›Full record

ArticleBiochemistry2015

Cytochrome P450 125A4, the Third Cholesterol C-26 Hydroxylase from Mycobacterium smegmatis.

Daniel J Frank, Christopher A Waddling, Maggie La, Paul R Ortiz de Montellano

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Structure-Function Analysis ofInternational journal of molecular sciences · 2025
    Article
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Daniel J FrankDepartment of Pharmaceutical Chemistry, University of California , San Francisco, California 94158-2517, United States.
Christopher A WaddlingDepartment of Biochemistry and Biophysics, University of California , San Francisco, California 94158-2517, United States.
Maggie LaDepartment of Pharmaceutical Chemistry, University of California , San Francisco, California 94158-2517, United States.
Paul R Ortiz de MontellanoDepartment of Pharmaceutical Chemistry, University of California , San Francisco, California 94158-2517, United States.
University of California, San Francisco · US

Funding

Resource for Biocomputing Visualization and InformaticsP41GM103311 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERRIN, THOMAS E · 2012 to 2017
$8.2M
Oxygen Sensors and P450 Monooxygenases in Mycobacertium tuberculosisR01AI074824 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ORTIZ DE MONTELLANO, PAUL R · 2007 to 2016
$4.3M
NIAID NIH HHS AI074824NIGMS NIH HHS P41 GM103311
6 · The paper itself

Abstract

Mycobacterium tuberculosis (Mtb) and Mycobacterium smegmatis (Msmeg) can grow on cholesterol as the sole carbon source. In Mtb the utilization of cholesterol can be initiated by CYP125A1 or CYP142A1 and in Msmeg by the orthologous CYP125A3 and CYP142A2. Double knockout of the two enzymes in Mtb prevents its growth on cholesterol, but the double knockout of Msmeg is still able to grow, albeit at a slower rate. We report here that Msmeg has a third enzyme, CYP125A4, that also oxidizes cholesterol, although it has a much higher activity for the oxidation of 7α-hydroxycholesterol. The ability of Msmeg CYP125A4 (and Mtb CYP125A1) to oxidize 7α-hydroxycholesterol is due, at least in part, to the presence of a smaller amino acid side chain facing C-7 of the sterol substrate than in CYP125A3. The ability to oxidize 7-substituted steroids broadens the range of sterol carbon sources for growth, but even more importantly in Mtb, additional biological effects are possible due to the potent immunomodulatory activity of 7α,26-dihydroxycholesterol.

Indexed as

Amino Acid SubstitutionBacterial ProteinsCatalytic DomainCholesterol 7-alpha-HydroxylaseCrystallography, X-RayCytochrome P-450 Enzyme SystemGene Knockout TechniquesGenes, BacterialHydroxycholesterolsKineticsModels, MolecularMutagenesis, Site-DirectedMycobacterium smegmatisSpectrophotometryStructural Homology, ProteinSubstrate SpecificityBacterial Proteinscholest-5-en-3 beta,7 alpha-diolCholesterol 7-alpha-HydroxylaseCytochrome P-450 Enzyme SystemHydroxycholesterols

Identifiers

PMID26522442
PMCPMC4660985
OpenAlexW2441969296

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.