Evidence map›Paper›PMID 26519260›Full record

ArticlePlant molecular biology2016

A set of GFP-based organelle marker lines combined with DsRed-based gateway vectors for subcellular localization study in rice (Oryza sativa L.).

Tsung-Meng Wu, Ke-Chun Lin, Wei-Shiang Liau, Yun-Yang Chao, Ling-Hung Yang, Szu-Yun Chen, Chung-An Lu, Chwan-Yang Hong

Abstract read
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In one paragraph

Article in Plant molecular biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Article
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  11. Plants (Basel, Switzerland) · 2021
    Article
  12. Review
  13. Article
  14. Article
  15. Green Fluorescent Protein- andFrontiers in plant science · 2019
    Article
  16. Article
  17. Article
  18. Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Tsung-Meng WuDepartment of Agricultural Chemistry, College of Bioresources and Agriculture, National Taiwan University, Taipei, 10617, Taiwan, ROC.
Ke-Chun LinDepartment of Agricultural Chemistry, College of Bioresources and Agriculture, National Taiwan University, Taipei, 10617, Taiwan, ROC.
Wei-Shiang LiauDepartment of Agricultural Chemistry, College of Bioresources and Agriculture, National Taiwan University, Taipei, 10617, Taiwan, ROC.
Yun-Yang ChaoDepartment of Agricultural Chemistry, College of Bioresources and Agriculture, National Taiwan University, Taipei, 10617, Taiwan, ROC.
Ling-Hung YangDepartment of Agricultural Chemistry, College of Bioresources and Agriculture, National Taiwan University, Taipei, 10617, Taiwan, ROC.
Szu-Yun ChenDepartment of Agricultural Chemistry, College of Bioresources and Agriculture, National Taiwan University, Taipei, 10617, Taiwan, ROC.
Chung-An LuDepartment of Life Sciences, National Central University, Jhongli City, Taoyuan County, 320, Taiwan, ROC.
Chwan-Yang HongDepartment of Agricultural Chemistry, College of Bioresources and Agriculture, National Taiwan University, Taipei, 10617, Taiwan, ROC. cyhong@ntu.edu.tw.
National Taiwan University · TWNational Central University · TWNational Pingtung University of Science and Technology · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the post-genomic era, many useful tools have been developed to accelerate the investigation of gene functions. Fluorescent proteins have been widely used as protein tags for studying the subcellular localization of proteins in plants. Several fluorescent organelle marker lines have been generated in dicot plants; however, useful and reliable fluorescent organelle marker lines are lacking in the monocot model rice. Here, we developed eight different GFP-based organelle markers in transgenic rice and created a set of DsRed-based gateway vectors for combining with the marker lines. Two mitochondrial-localized rice ascorbate peroxidase genes fused to DsRed and successfully co-localized with mitochondrial-targeted marker lines verified the practical use of this system. The co-localization of GFP-fusion marker lines and DsRed-fusion proteins provide a convenient platform for in vivo or in vitro analysis of subcellular localization of rice proteins.

Indexed as

Ascorbate PeroxidasesBiomarkersGenes, ReporterGenetic VectorsGreen Fluorescent ProteinsLuminescent ProteinsMitochondriaOrganellesOryzaPlant ProteinsPlants, Genetically ModifiedProtein TransportProtoplastsRecombinant Fusion ProteinsAscorbate PeroxidasesBiomarkersfluorescent protein 583Green Fluorescent ProteinsLuminescent ProteinsPlant ProteinsRecombinant Fusion ProteinsDsRedGFPOrganelle marker linesOryza sativaProtoplastSubcellular localization

Identifiers

PMID26519260
OpenAlexW2225596290

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.