Evidence map›Paper›PMID 26517682›Full record

ArticleOncotarget2015

Expression of young HERV-H loci in the course of colorectal carcinoma and correlation with molecular subtypes.

Philippe Pérot, Christina Susanne Mullins, Magali Naville, Cédric Bressan, Maja Hühns, Michael Gock, Florian Kühn, Jean-Nicolas Volff, Véronique Trillet-Lenoir, Michael Linnebacher and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 1 pooled it
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. Pooled it
  2. Pathogens (Basel, Switzerland) · 2026
    Review
  3. Article
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  6. Microorganisms · 2024
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  7. Article
  8. Review
  9. Current perspective on the impact of endogenous retroviruses in clear cell renal cell carcinoma.Kidney cancer journal : official journal of the Kidney Cancer Association · 2023
    Article
  10. Article
  11. Article
  12. Review
  13. Human Endogenous Retroviruses in Diseases.Sub-cellular biochemistry · 2023
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 2 countries.

Philippe PérotCancer Biomarkers Research Group, Joint Unit Hospices Civils de Lyon, bioMérieux, Centre Hospitalier Lyon Sud, Pierre Bénite, France.
Christina Susanne MullinsCancer Biomarkers Research Group, Joint Unit Hospices Civils de Lyon, bioMérieux, Centre Hospitalier Lyon Sud, Pierre Bénite, France.
Magali NavilleInstitut de Génomique Fonctionnelle de Lyon, Ecole Normale Supérieure de Lyon, CNRS/Université Lyon I, Lyon, France.
Cédric BressanCancer Biomarkers Research Group, Joint Unit Hospices Civils de Lyon, bioMérieux, Centre Hospitalier Lyon Sud, Pierre Bénite, France.
Maja HühnsInstitute of Pathology, University Medicine Rostock, Rostock, Germany.
Michael GockDepartment of General, Thoracic, Vascular and Transplantation Surgery, University Medicine Rostock, Rostock, Germany.
Florian KühnDepartment of General, Thoracic, Vascular and Transplantation Surgery, University Medicine Rostock, Rostock, Germany.
Jean-Nicolas VolffInstitut de Génomique Fonctionnelle de Lyon, Ecole Normale Supérieure de Lyon, CNRS/Université Lyon I, Lyon, France.
Véronique Trillet-LenoirCentre d'Investigation des Thérapeutiques en Oncologie et Hématologie, EMR 3738 Lyon Claude Bernard University, Institut de Cancérologie des Hospices Civils de Lyon, Lyon, France.
Michael LinnebacherDepartment of General Surgery, Molecular Oncology and Immunotherapy, University Medicine Rostock, Rostock, Germany.
François MalletCancer Biomarkers Research Group, Joint Unit Hospices Civils de Lyon, bioMérieux, Centre Hospitalier Lyon Sud, Pierre Bénite, France.
Hôpital Lyon Sud · FRHospices Civils de Lyon · FRUniversitätsmedizin Rostock · DEUniversité Claude Bernard Lyon 1 · FRUniversity of Rostock · DEInstitut de Génomique Fonctionnelle de Lyon · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundExpression of the human endogenous retrovirus (HERV)-H family has been associated with colorectal carcinomas (CRC), yet no individual HERV-H locus expression has been thoroughly correlated with clinical data.Here, we characterized HERV-H reactivations in clinical CRC samples by integrating expression profiles, molecular patterns and clinical data. Expression of relevant HERV-H sequences was analyzed by qRT-PCR on two well-defined clinical cohorts (n = 139 pairs of tumor and adjacent normal colon tissue) including samples from adenomas (n = 21) and liver metastases (n = 16). Correlations with clinical and molecular data were assessed.

resultsCRC specific HERV-H sequences were validated and found expressed throughout CRC disease progression. Correlations between HERV-H expression and lymph node invasion of tumor cells (p = 0.0006) as well as microsatellite instable tumors (p < 0.0001) were established. No association with regard to age, tumor localization, grading or common mutations became apparent. Interestingly, CRC expressed elements belonged to specific young HERV-H subfamilies and their 5' LTR often presented active histone marks.

conclusionThese results suggest a functional role of HERV-H sequences in colorectal carcinogenesis. The pronounced connection with microsatellite instability warrants a more detailed investigation. Thus, HERV-H sequences in addition to tumor specific mutations may represent clinically relevant, truly CRC specific markers for diagnostic, prognostic and therapeutic purposes.

Indexed as

Gene Expression Regulation, NeoplasticGene Expression Regulation, ViralAdultAgedAged, 80 and overBase SequenceColorectal NeoplasmsDisease ProgressionEndogenous RetrovirusesFemaleGenes, ViralHumansLymphatic MetastasisLymph NodesMaleMicrosatellite Instabilitybiomarkercolorectal cancerHERV-Hmicrosatellite instabilityqRT-PCR

Identifiers

PMID26517682
PMCPMC4741882
OpenAlexW2286764377

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.